ID R7QQQ6_CHOCR Unreviewed; 484 AA.
AC R7QQQ6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=PBS-linker domain-containing protein {ECO:0000259|PROSITE:PS51445};
GN ORFNames=CHC_T00006765001 {ECO:0000313|EMBL:CDF39720.1};
OS Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales;
OC Gigartinaceae; Chondrus.
OX NCBI_TaxID=2769 {ECO:0000313|EMBL:CDF39720.1, ECO:0000313|Proteomes:UP000012073};
RN [1] {ECO:0000313|Proteomes:UP000012073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Stackhouse {ECO:0000313|Proteomes:UP000012073};
RX PubMed=23503846; DOI=10.1073/pnas.1221259110;
RA Collen J., Porcel B., Carre W., Ball S.G., Chaparro C., Tonon T.,
RA Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F.,
RA Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y.,
RA Brillet L., Cabello-Hurtado F., Capella-Gutierrez S., Charrier B.,
RA Cladiere L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C.,
RA Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldon T.,
RA Gachon C.M., Groisillier A., Herve C., Jabbari K., Katinka M., Kloareg B.,
RA Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H.,
RA Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collen P., Panaud O.,
RA Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G.,
RA Symeonidi A., Weissenbach J., Zambounis A., Wincker P., Boyen C.;
RT "Genome structure and metabolic features in the red seaweed Chondrus
RT crispus shed light on evolution of the Archaeplastida.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:5247-5252(2013).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000256|ARBA:ARBA00004185}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004185}; Stromal side
CC {ECO:0000256|ARBA:ARBA00004185}.
CC -!- SIMILARITY: Belongs to the phycobilisome linker protein family.
CC {ECO:0000256|PROSITE-ProRule:PRU00775}.
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DR EMBL; HG002070; CDF39720.1; -; Genomic_DNA.
DR RefSeq; XP_005710014.1; XM_005709957.1.
DR AlphaFoldDB; R7QQQ6; -.
DR STRING; 2769.R7QQQ6; -.
DR EnsemblPlants; CDF39720; CDF39720; CHC_T00006765001.
DR GeneID; 17317745; -.
DR Gramene; CDF39720; CDF39720; CHC_T00006765001.
DR KEGG; ccp:CHC_T00006765001; -.
DR OrthoDB; 5630981at2759; -.
DR Proteomes; UP000012073; Unassembled WGS sequence.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030089; C:phycobilisome; IEA:UniProtKB-UniRule.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3130.20; Phycobilisome linker domain; 1.
DR InterPro; IPR001297; PBS_linker_dom.
DR InterPro; IPR038255; PBS_linker_sf.
DR PANTHER; PTHR34011:SF5; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2; 1.
DR PANTHER; PTHR34011; PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATED; 1.
DR Pfam; PF00427; PBS_linker_poly; 1.
DR PROSITE; PS51445; PBS_LINKER; 1.
PE 3: Inferred from homology;
KW Antenna complex {ECO:0000256|ARBA:ARBA00022549};
KW Chloroplast {ECO:0000256|ARBA:ARBA00022528};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW Phycobilisome {ECO:0000256|ARBA:ARBA00022738, ECO:0000256|PROSITE-
KW ProRule:PRU00775}; Plastid {ECO:0000256|ARBA:ARBA00022640};
KW Reference proteome {ECO:0000313|Proteomes:UP000012073};
KW Thylakoid {ECO:0000256|ARBA:ARBA00023078}.
FT DOMAIN 6..187
FT /note="PBS-linker"
FT /evidence="ECO:0000259|PROSITE:PS51445"
FT REGION 453..484
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 326..353
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 484 AA; 53884 MW; 76299FDD600728CB CRC64;
MNVEFQTYSG GLDRVSIDPY TITRDLFTPL PQNLNPEEKD VATAAGLRQL FGNAYLMEEE
RAQFYNAESQ YRCDQITAKE FLRAAAKSQT YRQRFFDSVS QYRFIELNFK HILGRAPLNQ
VEYSKHFKIF AAGGFDAEID SYFDDPEYDD VFGEDVMPYT RFRGTYAPIN QFNRMCTIEG
GFAGSDKCKP QMLVTSLAAN VPTSAFSVVD GLPAIPNSEH QSKKYDLPDA SLERFRNELE
IAAAKAYQLQ IELNEAYEKL SGFRDYANPF KAMAQDMNIT QLYGSNYGSG KVSVFAGEYI
GAKAGSWGPS GVDNINGPTR RPAVVIGKKE KQLERVKQLI VDLERKVSVL EAEREKPALT
PGVSISGFMD MQQQEVAKAQ AQSGSSVTMP LPAPVPRVIE VQPAEAENLI VPELVDVEDE
ESGLVKPQSV QVETKRQIKD VGRLPKELME EIEEEKKASG QDFLEGKGPR EAFPGDGSEM
VIGG
//
