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Database: UniProt
Entry: R7RSF8_9CLOT
LinkDB: R7RSF8_9CLOT
Original site: R7RSF8_9CLOT 
ID   R7RSF8_9CLOT            Unreviewed;       572 AA.
AC   R7RSF8;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 51.
DE   RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN   ORFNames=TCEL_02047 {ECO:0000313|EMBL:CDF58979.1};
OS   Thermobrachium celere DSM 8682.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Thermobrachium.
OX   NCBI_TaxID=941824 {ECO:0000313|EMBL:CDF58979.1, ECO:0000313|Proteomes:UP000014923};
RN   [1] {ECO:0000313|EMBL:CDF58979.1, ECO:0000313|Proteomes:UP000014923}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 8682 {ECO:0000313|EMBL:CDF58979.1,
RC   ECO:0000313|Proteomes:UP000014923};
RA   Ciranna A., Larjo A., Kivisto A., Santala V., Roos C., Karp M.;
RT   "Draft genome sequence of the hydrogen-ethanol-producing anaerobic
RT   alkalithermophilic Caloramator celere.";
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CDF58979.1}.
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DR   EMBL; CAVN010000110; CDF58979.1; -; Genomic_DNA.
DR   RefSeq; WP_018664154.1; NZ_HF952022.1.
DR   AlphaFoldDB; R7RSF8; -.
DR   eggNOG; COG3829; Bacteria.
DR   HOGENOM; CLU_000445_8_1_9; -.
DR   OrthoDB; 9803970at2; -.
DR   Proteomes; UP000014923; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   Pfam; PF15714; SpoVT_C; 1.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000014923};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          272..502
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   572 AA;  65683 MW;  614C3E5700EFA750 CRC64;
     MKELKDIKDY AQNIAEIIKS VVGVDVTIVD SNNVRVAATG MYKDLIGKKI VQKSAFRRAM
     ELKKILIIDE PRIDEVCREC ENKLKCIEYA EVCSPIIVDD RVVGVIGLVA LEEEQKQQLN
     KNKENLIKFL NKMSDMLSTK ISELNICEKQ KLLINQIETI VNSIDEGIIA LDLEQNILFK
     NKIVDDNFDE DEIKKFIEKI LDESTYIDVM QGREKRNMQF GIGERNFLVT LKPIIYNNKT
     QGIIISLKSM KDINKIIRDV TFININTTFE GIIGRSEKFL KVIEIAKKTS KADSTVLILG
     ESGTGKELFA RAIHNESKRK NKPFIAVNCA AIPESLLESE LFGFEEGAFT GAKKGGKIGK
     FELANGGTLF LDEIGDMPLH LQVKLLRVLQ EKCIERIGSN RQVSVDIRII AATHKNLEDM
     VLKGEFRQDL YYRLNVIPIK IPPLRERRDD IKILMDYILN KFCIKFNKRI YGFDEDVYSA
     FLKYEWPGNV RELENVIEYL VNMYNECFIT YDMLPEKLKG DNNAINTFNL KYHEKLLIKE
     ALKKFNSRDE AAKALGIGRA TLFRKIKEYD LD
//
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