ID R7SWK0_DICSQ Unreviewed; 604 AA.
AC R7SWK0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=PIN domain-like protein {ECO:0000313|EMBL:EJF60105.1};
GN ORFNames=DICSQDRAFT_127846 {ECO:0000313|EMBL:EJF60105.1};
OS Dichomitus squalens (strain LYAD-421) (Western red white-rot fungus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Polyporales; Polyporaceae; Dichomitus.
OX NCBI_TaxID=732165 {ECO:0000313|EMBL:EJF60105.1, ECO:0000313|Proteomes:UP000053319};
RN [1] {ECO:0000313|EMBL:EJF60105.1, ECO:0000313|Proteomes:UP000053319}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LYAD-421 SS1 {ECO:0000313|EMBL:EJF60105.1,
RC ECO:0000313|Proteomes:UP000053319};
RX PubMed=22745431; DOI=10.1126/science.1221748;
RA Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., Henrissat B.,
RA Martinez A.T., Otillar R., Spatafora J.W., Yadav J.S., Aerts A., Benoit I.,
RA Boyd A., Carlson A., Copeland A., Coutinho P.M., de Vries R.P.,
RA Ferreira P., Findley K., Foster B., Gaskell J., Glotzer D., Gorecki P.,
RA Heitman J., Hesse C., Hori C., Igarashi K., Jurgens J.A., Kallen N.,
RA Kersten P., Kohler A., Kuees U., Kumar T.K.A., Kuo A., LaButti K.,
RA Larrondo L.F., Lindquist E., Ling A., Lombard V., Lucas S., Lundell T.,
RA Martin R., McLaughlin D.J., Morgenstern I., Morin E., Murat C., Nagy L.G.,
RA Nolan M., Ohm R.A., Patyshakuliyeva A., Rokas A., Ruiz-Duenas F.J.,
RA Sabat G., Salamov A., Samejima M., Schmutz J., Slot J.C., St John F.,
RA Stenlid J., Sun H., Sun S., Syed K., Tsang A., Wiebenga A., Young D.,
RA Pisabarro A., Eastwood D.C., Martin F., Cullen D., Grigoriev I.V.,
RA Hibbett D.S.;
RT "The Paleozoic origin of enzymatic lignin decomposition reconstructed from
RT 31 fungal genomes.";
RL Science 336:1715-1719(2012).
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DR EMBL; JH719418; EJF60105.1; -; Genomic_DNA.
DR RefSeq; XP_007367059.1; XM_007366997.1.
DR AlphaFoldDB; R7SWK0; -.
DR GeneID; 18834417; -.
DR KEGG; dsq:DICSQDRAFT_127846; -.
DR HOGENOM; CLU_007575_2_1_1; -.
DR OMA; AWIPETV; -.
DR OrthoDB; 1779469at2759; -.
DR Proteomes; UP000053319; Unassembled WGS sequence.
DR GO; GO:0008821; F:crossover junction DNA endonuclease activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProt.
DR CDD; cd09906; H3TH_YEN1; 1.
DR CDD; cd09870; PIN_YEN1; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 2.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR041177; GEN1_C.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR InterPro; IPR037316; Yen1_H3TH.
DR PANTHER; PTHR11081:SF71; ENDONUCLEASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G13260)-RELATED; 1.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR Pfam; PF18380; GEN1_C; 1.
DR Pfam; PF00867; XPG_I; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000053319}.
FT DOMAIN 1..101
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 113..200
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
FT REGION 379..460
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 493..536
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 561..604
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 512..531
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 585..604
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 604 AA; 65673 MW; 1611D1E3A41F99A7 CRC64;
MGVPGLWDVL RPAGKMRSLT HLSVKDGFEA NPDGKRGFRV GIDASIWFYH ATYGREGENP
ELRTLFFRCT RLMGMPFLPL FVFDGPKRPE IKRGKRISGK NHWMVQGMQE IISAFGFEWR
MASGSVAPGE AEAELAYLNR IGVIDAVLSD DVDTFLFGAK LVVRNPSATL SGNRTNPMKN
AAGKDDGNHV MTYAAADLRA HPDIQLTQGG LVLVGVLRGG DYSDGLHGCG VQTAHGLARA
GFGDALLDAA RTLPRDALAA FLARWREDVR VELRTNARGC LPRKCAALAR AVPEDFPSVD
VVLAYARPVT SEAKGAAHRN ANVAWDRDPD LGRIAGLCEM YFEWGVKEII VKRFSTVLWP
AAVLRILRRA AILRDGEAGA GRGAGALGER GEEGEEPGTP PRKGGSGRGA LPGTPSSVIA
KHFSTMALGG PSRGAGRTQD SDGEEEEEGE RLIVKIHSAR EHPSTDRIRE YRLEVAPAQL
VRLCEAGVRG LRTALPPDLS DDDEEEEVDD DDEGGGKRKG RRGKKAPPDP ESHLRMWLPA
CMVEMVEPEM VDEFEGVQRW KAEKKAGKGG KAAGQGQGNE GKGEGWRKCG GRSEEQSEQD
FEQR
//
