ID   R7YZX9_CONA1            Unreviewed;       370 AA.
AC   R7YZX9;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   RecName: Full=Ribosomal RNA-processing protein 42 {ECO:0000256|ARBA:ARBA00042523};
GN   ORFNames=W97_06646 {ECO:0000313|EMBL:EON67393.1};
OS   Coniosporium apollinis (strain CBS 100218) (Rock-inhabiting black yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC   Dothideomycetes incertae sedis; Coniosporium.
OX   NCBI_TaxID=1168221 {ECO:0000313|EMBL:EON67393.1, ECO:0000313|Proteomes:UP000016924};
RN   [1] {ECO:0000313|Proteomes:UP000016924}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CBS 100218 {ECO:0000313|Proteomes:UP000016924};
RG   The Broad Institute Genome Sequencing Platform;
RA   Cuomo C., Gorbushina A., Noack S., Walker B., Young S.K., Zeng Q.,
RA   Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L.,
RA   Arachchi H.M., Berlin A.M., Chapman S.B., Goldberg J., Griggs A., Gujja S.,
RA   Hansen M., Howarth C., Imamovic A., Larimer J., McCowan C., Montmayeur A.,
RA   Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T.,
RA   Sisk P., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT   "The genome sequence of Coniosporium apollinis CBS 100218.";
RL   Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   -!- SIMILARITY: Belongs to the RNase PH family.
CC       {ECO:0000256|ARBA:ARBA00006678}.
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DR   EMBL; JH767587; EON67393.1; -; Genomic_DNA.
DR   RefSeq; XP_007782710.1; XM_007784520.1.
DR   AlphaFoldDB; R7YZX9; -.
DR   STRING; 1168221.R7YZX9; -.
DR   GeneID; 19903957; -.
DR   eggNOG; KOG1612; Eukaryota.
DR   HOGENOM; CLU_046570_0_0_1; -.
DR   OMA; INKRWHW; -.
DR   OrthoDB; 2070785at2759; -.
DR   Proteomes; UP000016924; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:UniProt.
DR   Gene3D; 3.30.230.70; GHMP Kinase, N-terminal domain; 1.
DR   InterPro; IPR001247; ExoRNase_PH_dom1.
DR   InterPro; IPR027408; PNPase/RNase_PH_dom_sf.
DR   InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR   PANTHER; PTHR11097:SF8; EXOSOME COMPLEX COMPONENT RRP42; 1.
DR   PANTHER; PTHR11097; EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN; 1.
DR   Pfam; PF01138; RNase_PH; 1.
DR   SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Exosome {ECO:0000256|ARBA:ARBA00022835};
KW   Reference proteome {ECO:0000313|Proteomes:UP000016924}.
FT   DOMAIN          39..199
FT                   /note="Exoribonuclease phosphorolytic"
FT                   /evidence="ECO:0000259|Pfam:PF01138"
SQ   SEQUENCE   370 AA;  39704 MW;  92948EF50DE06996 CRC64;
     MAPASSTQFL PLSPAELSYL HSSLSLSPPI RPDGRTPTQL RPLIAETDIL ASANGSARVC
     FADGTEAVVG IKAEVEKSQW RPEHGAHLGT GGGDIEILGD DEDADNGNTE IEGKGENAWV
     EMSTDIPGFR DDDQLPVFLS AMLTEALLAS GKLKDRLYIN RRFHWKLYID ILLLSSTFSY
     PLPLLSLTTH LALLSSRLPR LKSELDEDPL FDDDWDASTF LYPLASGNPT KSTARTNRPP
     ITLLVIAVGQ NIIFDPSKEE LAVAEAVVAV SVGHLETGEG LKLLAIRTID PPSRLTPPGI
     PNSMNSTTGG IAPTSNQDAV TQQEVSDAGG VWRPPRGGIK RSLIGRIVKM ALEKGGVGEE
     IMEGLANVET
//