ID R9BYG9_9BACI Unreviewed; 557 AA.
AC R9BYG9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EOR21785.1};
GN ORFNames=A499_21340 {ECO:0000313|EMBL:EOR21785.1};
OS Niallia nealsonii AAU1.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Niallia.
OX NCBI_TaxID=1202533 {ECO:0000313|EMBL:EOR21785.1, ECO:0000313|Proteomes:UP000014030};
RN [1] {ECO:0000313|EMBL:EOR21785.1, ECO:0000313|Proteomes:UP000014030}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAU1 {ECO:0000313|EMBL:EOR21785.1,
RC ECO:0000313|Proteomes:UP000014030};
RA Joshi C.G., Duggirala S.M., Nathani N.M., Bhatt V.D., KaPatel J.A.,
RA Parnerkar S.P.;
RT "Whole genome shotgun sequencing of Bacillus nealsonii AAU1.";
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOR21785.1}.
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DR EMBL; ASRU01000260; EOR21785.1; -; Genomic_DNA.
DR RefSeq; WP_016204778.1; NZ_ASRU01000260.1.
DR AlphaFoldDB; R9BYG9; -.
DR PATRIC; fig|1202533.3.peg.4422; -.
DR OrthoDB; 9771372at2; -.
DR Proteomes; UP000014030; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 121..176
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 252..482
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 557 AA; 63304 MW; 74B153A64A3AF0F0 CRC64;
MFTDSQMKIE TSFTILSDDE KVGTLTEVLQ DYSYIIIESK QLFVIGKAER FLVAAVRKDQ
KIKDWLQISE LLPSEYFSIQ DIQKEKINWL RPVIIKKQNE YQGIVTAAER IRSLQRENKY
IMTYFETLAE TMNDAVTAVD NNGTVFYWNS VAEDTYHIKK EAIIGKKIGE HFDSESIQLH
QILKVGNPIR GTYHRPNEHT HVLINASPVL VDNKIIGGIS TEHDITKLIH LNQELDSNSV
LYVQKEAPFS SVLSSSKEVK RAVEIAQKVA SAEIPVLISG ETGTGKEQLA QAIHYGGSKR
KNPLLSLNCS TIPKDLIEME LFGYQKMTFD SGDTEEIEGK VEQAETGTLF IEEVDKMPLA
VQEKLLHYMT EQSFTRVGGE PQKKPATRFI LSSTQPLGEL VRKGEFNEKL YYQISVIHIE
IPPLRKRKED IPHLVNNFIK MYNEKYAKKI TKINEQALHI LCAYDWPGNI KELKNVIEHS
VLVSEGNNEL TLEYIPAEIV DNYKVSIQGG KGNKEDNEME RIEEALKKTY GNKSAAATLL
GISRGTLYNK IKEFGLK
//
