ID R9IK64_9FIRM Unreviewed; 598 AA.
AC R9IK64;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EOS22329.1};
GN ORFNames=C804_05735 {ECO:0000313|EMBL:EOS22329.1};
OS Lachnospiraceae bacterium A4.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=397291 {ECO:0000313|EMBL:EOS22329.1, ECO:0000313|Proteomes:UP000014118};
RN [1] {ECO:0000313|EMBL:EOS22329.1, ECO:0000313|Proteomes:UP000014118}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=A4 {ECO:0000313|EMBL:EOS22329.1,
RC ECO:0000313|Proteomes:UP000014118};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Xavier R., Elson C., Duck W., Walker B., Young S., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Lachnospiraceae bacterium A4.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOS22329.1}.
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DR EMBL; ASSR01000141; EOS22329.1; -; Genomic_DNA.
DR AlphaFoldDB; R9IK64; -.
DR STRING; 397291.C804_05735; -.
DR PATRIC; fig|397291.3.peg.5953; -.
DR eggNOG; COG3505; Bacteria.
DR HOGENOM; CLU_015347_6_2_9; -.
DR OrthoDB; 9766496at2; -.
DR Proteomes; UP000014118; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000014118};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 566..598
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 566..589
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 598 AA; 66775 MW; C893B33F311EBBE1 CRC64;
MQPVIMLVVS GIFMFAVIGG ISLMSHYYTL NGIKNRTVGD GQHGTARFAG KKEIKETYIE
VQYEPERWRK GQNLPKAQGL VLGSIERAGK LYALVDTGDV HCLMIGAAGV GKTAHFLYPN
IEYACACGMS FLTTDTKGDL YRNYAGIAKK YYAYETAVID LRNPTRSDGD NMLHLVNKYM
DQFLADSDNL SAKAKAEKYA KITAKTIISS GGADSSSYGQ NAFFYDAAEG VLTAAILLIA
EFCPNEKRHI ISVFKLIQDL LAPSKVKGKN QFQLLMAKLP DTHKAKWFAG AALNTAEQSM
QSVLSTALSR LNSFLDSELE QILCFDTAID AEQFCKKKTA VFLVMPEEDN TKYFIISLIL
QQLYREILVV ADENGGKLDN RVVFYWDEVG TIPKIESAEM MFSASRSRKV SIVPMIQSFA
QLNKNYGKEG AEIIIDNCQD TIFGGFAPNS ESAEVLSKSL GNRTVLSGSI SRGKNDPSQS
LQMMQRPLMT PDELKSLPKG NFIVSKTGCH PMKTKLKLFL KWGITFEEPY EIEEKSARKV
AYADKQEIEE EIVRRYMCCV DEEQENTRQN TANRNGGMQQ TQMNENVARV RQPLRTED
//
