ID R9JA83_9FIRM Unreviewed; 577 AA.
AC R9JA83;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Stage V sporulation protein D (Sporulation-specific penicillin-binding protein) {ECO:0008006|Google:ProtNLM};
GN ORFNames=C807_01707 {ECO:0000313|EMBL:EOS31129.1};
OS Lachnospiraceae bacterium 28-4.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=397287 {ECO:0000313|EMBL:EOS31129.1, ECO:0000313|Proteomes:UP000014112};
RN [1] {ECO:0000313|EMBL:EOS31129.1, ECO:0000313|Proteomes:UP000014112}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=28-4 {ECO:0000313|EMBL:EOS31129.1,
RC ECO:0000313|Proteomes:UP000014112};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Xavier R., Elson C., Duck W., Walker B., Young S., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Lachnospiraceae bacterium 28-4.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOS31129.1}.
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DR EMBL; ASSU01000015; EOS31129.1; -; Genomic_DNA.
DR AlphaFoldDB; R9JA83; -.
DR STRING; 397287.C807_01707; -.
DR PATRIC; fig|397287.3.peg.1835; -.
DR eggNOG; COG0768; Bacteria.
DR HOGENOM; CLU_009289_6_0_9; -.
DR Proteomes; UP000014112; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF1; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000014112};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 56..202
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 245..564
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 577 AA; 63473 MW; A7BE0E6CBC96821F CRC64;
MAMKNKTYIR KKIVVTFFLC AAAFLMLIGR LVYLMVGRSG HYTEAAKDLH ERERSIKAAR
GRIIDSTGAV LADNRTVCTI SVIHNQISDP QRVVEVLSKE LELSEEYVSQ RVEKYSAIER
IKSNVDKSIG DKIREYDLDG VKVDEDYKRY YPYETLASKV LGFTGGDNQG IIGLEVIYEE
YLKGKEGTIL TVTDAKGVEI AEAGEERIEP ESGNDVYVSL DINIQSYATQ LAMQAMETKQ
ADSVSILVMN PQNGEILAMV NVPEFDLNDP YTLPEGVPQP ASQEEKQNAL NQMWRNGCIN
DTYEPGSTFK IITAAAGLES GEVTVNDSFS CPGYIMVEDR RIRCHKVGGH GAENFVQGTM
NSCNPVFITV GMRIGVDRYY DYFQKFGLLT KTGVDLPGEA GTIMHKKENI GAVELATISF
GQSFQITPIQ LATTASSIVN GGNRVTPHFG VKVVNGKGET VENLQYPVKK GVVSEQTSET
MRYILEQVVE NGSGKNGYVE GYRVGGKTAT SQTLPRGSGR YISSFLGFAP ADDPKVLAVA
IINNPQGVYY GGQIAAPVVR QLFENILPYL EGMDYNT
//