ID R9TRF4_9CAUD Unreviewed; 839 AA.
AC R9TRF4;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 08-NOV-2023, entry version 29.
DE SubName: Full=Large terminase subunit {ECO:0000313|EMBL:AGN34282.1};
GN ORFNames=VPRG_00040 {ECO:0000313|EMBL:AGN34282.1};
OS Vibrio phage pYD38-A.
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Roufvirus; Roufvirus pIS4A.
OX NCBI_TaxID=754051 {ECO:0000313|EMBL:AGN34282.1, ECO:0000313|Proteomes:UP000201358};
RN [1] {ECO:0000313|EMBL:AGN34282.1, ECO:0000313|Proteomes:UP000201358}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=pYD38 {ECO:0000313|Proteomes:UP000201358};
RG The Broad Institute Genome Sequencing Platform;
RA Henn M.R., Wolf A., Jost G., Levin J., Malboeuf C., Casali M., Russ C.,
RA Lennon N., Chapman S.B., Erlich R., Young S.K., Yandava C., Zeng Q.,
RA Alvarado L., Anderson S., Berlin A., Chen Z., Freedman E., Gellesch M.,
RA Goldberg J., Green L., Griggs A., Gujja S., Heilman E.R., Heiman D.,
RA Hollinger A., Howarth C., Larson L., Mehta T., Pearson M., Roberts A.,
RA Ryan E., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S.,
RA White J., Haas B., Nusbaum C., Birren B.;
RT "The Genome Sequence of Vibrio phage pYD38-A.";
RL Submitted (DEC-2010) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JF974312; AGN34282.1; -; Genomic_DNA.
DR RefSeq; YP_008126204.1; NC_021534.1.
DR GeneID; 16045528; -.
DR KEGG; vg:16045528; -.
DR Proteomes; UP000201358; Genome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0030908; P:protein splicing; IEA:InterPro.
DR Gene3D; 3.30.420.280; -; 1.
DR Gene3D; 2.170.16.10; Hedgehog/Intein (Hint) domain; 1.
DR Gene3D; 3.10.28.10; Homing endonucleases; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR036844; Hint_dom_sf.
DR InterPro; IPR007868; Hom_end_hint.
DR InterPro; IPR007869; Homing_endonuc_PI-Sce.
DR InterPro; IPR027434; Homing_endonucl.
DR InterPro; IPR004042; Intein_endonuc.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR006437; Phage_terminase_lsu.
DR InterPro; IPR035413; Terminase_L_C.
DR InterPro; IPR035412; Terminase_L_N.
DR NCBIfam; TIGR01547; phage_term_2; 1.
DR PANTHER; PTHR39184; -; 1.
DR PANTHER; PTHR39184:SF1; PBSX PHAGE TERMINASE LARGE SUBUNIT; 1.
DR Pfam; PF05204; Hom_end; 1.
DR Pfam; PF05203; Hom_end_hint; 1.
DR Pfam; PF04466; Terminase_3; 1.
DR Pfam; PF17288; Terminase_3C; 1.
DR SUPFAM; SSF51294; Hedgehog/intein (Hint) domain; 1.
DR SUPFAM; SSF55608; Homing endonucleases; 2.
DR PROSITE; PS50819; INTEIN_ENDONUCLEASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000201358}.
FT DOMAIN 224..359
FT /note="DOD-type homing endonuclease"
FT /evidence="ECO:0000259|PROSITE:PS50819"
SQ SEQUENCE 839 AA; 96255 MW; 76E907343A8065CE CRC64;
MARKRLSAPA IEKLEEIIGD GVIDAPESAV FGVVNTDKQI VRKLKMTQSG VDDVSDSDIG
VDHLIPEKLE KLLYPKRNKI VFGGRGCLAI GTMVRMFDGS LKRVEDIVVG DKVMGPDSKP
RNVLNICRGF DDMYTVHQKY ADDYTVNSSH ILSLRKIPSA ISDETKTPDG KRIYRYHPNE
PEILNIGVSE YLSRATSKKF RHVFKGWRTG WDFNDQSVPV DPYFLGLWLG DGSSRGVEVC
TPDPEIVDYI HNVASQYGMQ VKVRDDDRCP VYAITNGLAA GMGKNTNPLL TKMQQLGVIN
NKHIPDCYIK NSREVRLQIL AGLLDTDSHY DQKKKSYSFT SINKEMAFSL MDVARSLGFK
SSIIKKTDVT FEYKGEKRIY EKDVWEVFVS GDIHTIPCRV KRKIAEKTKS TRGKMTEVSL
SYAGHGEYAG FTLDGDHLFL LADGTVTHNS GKTRTVTTIL TERARFKPDR IACFREIQQS
IEDSSYQELK DEIDRKGETK EFRVINNEIT HKGTKAKFRF KGLYRNQTTV KGFAGITVAW
VEEAENVSQT SWEILTPTVR AEGSEIWVTF NPNKEHDPTW KIWVEPFYNK LRENGGIYED
DENLIIECNY SDNPWFWDTP LPSQMQRMKE TDFDRYQWVW GGRFNKRNDE QVFGGKWRVA
DFEVKPEWHG PYFGIDFGFS QDATAMVEVY IEKLPDDRRN LYVAREYGRV GLEITDTPTA
MEQSFPLSRK ARWYGDCSRP ETISHIKRAG FDIHPCNKWP GSVEEGVTWL RGCDSIIIHD
RCTQTQEEFT MYSYKVDKLT GNVLTNIVDA WNHFIDAIRY ACNDHIVQRG SGWIRRSRR
//
