ID RL1_ALIF1 Reviewed; 234 AA.
AC Q5E234; Q5E233;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-OCT-2007, sequence version 2.
DT 27-MAR-2024, entry version 108.
DE RecName: Full=Large ribosomal subunit protein uL1 {ECO:0000255|HAMAP-Rule:MF_01318};
DE AltName: Full=50S ribosomal protein L1 {ECO:0000305};
GN Name=rplA {ECO:0000255|HAMAP-Rule:MF_01318}; OrderedLocusNames=VF_2418;
OS Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=312309;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700601 / ES114;
RX PubMed=15703294; DOI=10.1073/pnas.0409900102;
RA Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R.,
RA Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E.,
RA Stevens A., Visick K., Whistler C., Greenberg E.P.;
RT "Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with
RT pathogenic congeners.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005).
RN [2]
RP SEQUENCE REVISION.
RX PubMed=18366731; DOI=10.1186/1471-2164-9-138;
RA Mandel M.J., Stabb E.V., Ruby E.G.;
RT "Comparative genomics-based investigation of resequencing targets in Vibrio
RT fischeri: focus on point miscalls and artefactual expansions.";
RL BMC Genomics 9:138-138(2008).
CC -!- FUNCTION: Binds directly to 23S rRNA. The L1 stalk is quite mobile in
CC the ribosome, and is involved in E site tRNA release.
CC {ECO:0000255|HAMAP-Rule:MF_01318}.
CC -!- FUNCTION: Protein L1 is also a translational repressor protein, it
CC controls the translation of the L11 operon by binding to its mRNA.
CC {ECO:0000255|HAMAP-Rule:MF_01318}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01318}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uL1 family.
CC {ECO:0000255|HAMAP-Rule:MF_01318}.
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DR EMBL; CP000020; AAW86913.2; -; Genomic_DNA.
DR RefSeq; WP_011262793.1; NC_006840.2.
DR RefSeq; YP_205801.2; NC_006840.2.
DR AlphaFoldDB; Q5E234; -.
DR SMR; Q5E234; -.
DR STRING; 312309.VF_2418; -.
DR EnsemblBacteria; AAW86913; AAW86913; VF_2418.
DR KEGG; vfi:VF_2418; -.
DR PATRIC; fig|312309.11.peg.2450; -.
DR eggNOG; COG0081; Bacteria.
DR HOGENOM; CLU_062853_0_0_6; -.
DR OrthoDB; 9803740at2; -.
DR Proteomes; UP000000537; Chromosome I.
DR GO; GO:0015934; C:large ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00403; Ribosomal_L1; 1.
DR Gene3D; 3.30.190.20; -; 1.
DR Gene3D; 3.40.50.790; -; 1.
DR HAMAP; MF_01318_B; Ribosomal_uL1_B; 1.
DR InterPro; IPR005878; Ribosom_uL1_bac-type.
DR InterPro; IPR002143; Ribosomal_uL1.
DR InterPro; IPR023674; Ribosomal_uL1-like.
DR InterPro; IPR028364; Ribosomal_uL1/biogenesis.
DR InterPro; IPR016095; Ribosomal_uL1_3-a/b-sand.
DR InterPro; IPR023673; Ribosomal_uL1_CS.
DR NCBIfam; TIGR01169; rplA_bact; 1.
DR PANTHER; PTHR36427:SF3; 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR36427; 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL; 1.
DR Pfam; PF00687; Ribosomal_L1; 1.
DR PIRSF; PIRSF002155; Ribosomal_L1; 1.
DR SUPFAM; SSF56808; Ribosomal protein L1; 1.
DR PROSITE; PS01199; RIBOSOMAL_L1; 1.
PE 3: Inferred from homology;
KW Reference proteome; Repressor; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding; Translation regulation; tRNA-binding.
FT CHAIN 1..234
FT /note="Large ribosomal subunit protein uL1"
FT /id="PRO_0000307661"
SQ SEQUENCE 234 AA; 24895 MW; 4F8C79BAC93AF91A CRC64;
MAKLTKRMRN IREKVEVTKE YDINEAVALL KELATAKFTE SVDVAVNLGI DARKSDQNVR
GATVLPHGTG REIRVAVFTQ GANAEAAKEA GADLVGMEDL AELVKKGEMN FDVVVASPDA
MRVVGQLGTI LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF
DAAQLKENLE ALLVALKKAK PTSAKGTFVK KVSISTTMGA GVSLDQATLN TQTN
//
