ID S3DCA3_GLAL2 Unreviewed; 367 AA.
AC S3DCA3;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Insert subdomain of RNA polymerase alpha subunit {ECO:0000313|EMBL:EPE29641.1};
GN ORFNames=GLAREA_00801 {ECO:0000313|EMBL:EPE29641.1};
OS Glarea lozoyensis (strain ATCC 20868 / MF5171).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Helotiales; Helotiaceae; Glarea.
OX NCBI_TaxID=1116229 {ECO:0000313|EMBL:EPE29641.1, ECO:0000313|Proteomes:UP000016922};
RN [1] {ECO:0000313|EMBL:EPE29641.1, ECO:0000313|Proteomes:UP000016922}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 20868 / MF5171 {ECO:0000313|Proteomes:UP000016922};
RX PubMed=23688303; DOI=10.1186/1471-2164-14-339;
RA Chen L., Yue Q., Zhang X., Xiang M., Wang C., Li S., Che Y.,
RA Ortiz-Lopez F.J., Bills G.F., Liu X., An Z.;
RT "Genomics-driven discovery of the pneumocandin biosynthetic gene cluster in
RT the fungus Glarea lozoyensis.";
RL BMC Genomics 14:339-339(2013).
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR EMBL; KE145367; EPE29641.1; -; Genomic_DNA.
DR RefSeq; XP_008083750.1; XM_008085559.1.
DR AlphaFoldDB; S3DCA3; -.
DR STRING; 1116229.S3DCA3; -.
DR GeneID; 19459859; -.
DR KEGG; glz:GLAREA_00801; -.
DR eggNOG; KOG1521; Eukaryota.
DR HOGENOM; CLU_038421_0_1_1; -.
DR OMA; ECLRHPE; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000016922; Unassembled WGS sequence.
DR GO; GO:0055029; C:nuclear DNA-directed RNA polymerase complex; IEA:UniProt.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0001054; F:RNA polymerase I activity; IEA:InterPro.
DR GO; GO:0001056; F:RNA polymerase III activity; IEA:InterPro.
DR CDD; cd07032; RNAP_I_II_AC40; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR033901; RNAPI/III_AC40.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF13; DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Reference proteome {ECO:0000313|Proteomes:UP000016922};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 57..361
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
SQ SEQUENCE 367 AA; 41083 MW; 4EBA3DC5902AFC33 CRC64;
MRPRHTLILI VGVNSETVTD VTSTDFPGHW PGEDHAWDIS KFASTFKVKV YKNEHEETSF
SLIGIDASVA NAYRRILIAE IPSLAIERVY IYNNTSIIQD EVLAARLGLI PLKGGEKGLK
EFLKWYRKTK EGEEPDIATD YNTIRLHLKV ECTRNENAAP GERDPLKLYH NAHVYAKDLE
FVPFGQQAKH FSGEDAIMST NPDILIAKLR PGQILDIEMD AIKGQGSDHA KFSPVAPASY
RLLPTITITK PILGKDAEKF ARCFPKGVIG FETVTKKEAA TKGSGYEGHE GEKKAVVLDA
MKDTVSRECL RHAEFEGKVK LGRIRDHFIF SIESVGQWGS GELFLESVKM LRQKCEGLLS
NLRDMPN
//
