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Database: UniProt
Entry: S3DZR2_9GAMM
LinkDB: S3DZR2_9GAMM
Original site: S3DZR2_9GAMM 
ID   S3DZR2_9GAMM            Unreviewed;      1310 AA.
AC   S3DZR2;
DT   18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT   18-SEP-2013, sequence version 1.
DT   03-JUL-2019, entry version 33.
DE   SubName: Full=ATP-dependent RNA helicase HrpA {ECO:0000313|EMBL:EPE37451.1};
GN   ORFNames=O1U_0754 {ECO:0000313|EMBL:EPE37451.1};
OS   Candidatus Photodesmus katoptron Akat1.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC   Vibrionaceae; Candidatus Photodesmus.
OX   NCBI_TaxID=1236703 {ECO:0000313|EMBL:EPE37451.1, ECO:0000313|Proteomes:UP000053688};
RN   [1] {ECO:0000313|EMBL:EPE37451.1, ECO:0000313|Proteomes:UP000053688}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Akat1 {ECO:0000313|EMBL:EPE37451.1,
RC   ECO:0000313|Proteomes:UP000053688};
RX   PubMed=24118864; DOI=10.1111/1462-2920.12302;
RA   Hendry T.A., de Wet J.R., Dunlap P.V.;
RT   "Genomic signatures of obligate host dependence in the luminous
RT   bacterial symbiont of a vertebrate.";
RL   Environ. Microbiol. 16:2611-2622(2014).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:EPE37451.1}.
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DR   EMBL; AMSD01000002; EPE37451.1; -; Genomic_DNA.
DR   RefSeq; WP_016504083.1; NZ_AMSD01000002.1.
DR   STRING; 28176.CF66_5013; -.
DR   EnsemblBacteria; EPE37451; EPE37451; O1U_0754.
DR   PATRIC; fig|1236703.3.peg.779; -.
DR   OrthoDB; 58588at2; -.
DR   Proteomes; UP000053688; Unassembled WGS sequence.
DR   GO; GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.
DR   CDD; cd00079; HELICc; 1.
DR   InterPro; IPR011709; DUF1605.
DR   InterPro; IPR018647; DUF2075.
DR   InterPro; IPR007502; Helicase-assoc_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR024590; HrpA_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR010222; RNA_helicase_HrpA.
DR   Pfam; PF09848; DUF2075; 1.
DR   Pfam; PF11898; DUF3418; 1.
DR   Pfam; PF04408; HA2; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07717; OB_NTP_bind; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00847; HA2; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   TIGRFAMs; TIGR01967; DEAH_box_HrpA; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000313|EMBL:EPE37451.1};
KW   Complete proteome {ECO:0000313|Proteomes:UP000053688};
KW   Helicase {ECO:0000313|EMBL:EPE37451.1};
KW   Hydrolase {ECO:0000313|EMBL:EPE37451.1};
KW   Nucleotide-binding {ECO:0000313|EMBL:EPE37451.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000053688}.
FT   DOMAIN       89    252       Helicase ATP-binding.
FT                                {ECO:0000259|PROSITE:PS51192}.
FT   DOMAIN      275    446       Helicase C-terminal.
FT                                {ECO:0000259|PROSITE:PS51194}.
SQ   SEQUENCE   1310 AA;  151850 MW;  8892496CEC4515FF CRC64;
     MVGKVLDIDA KGLLRNVLSQ CMLCDRLDLI NRISDASKIR QKTLRNKVLN KIALDISLSN
     IKAERRTGIN LTINYPAILP VSQKKNDIAK AIKSNQVVII SGEPGSGKTT QLPKIFLELG
     YGKFGSIAHT QPRRIAAQSV AKRISEEMGT KLGEAVGYKV RFSEKISQYT LVKLMTDGMF
     LAEIQHDRFL NQYDAVIIDE AHERSLNIDF ILGYLKKLIL TRSELRIIVT SATIDVERFS
     AYFSNAPIIE VSGSTYPVEI EYRPLCTNNN VENKQLESIC EIVEEICNSQ KKGDILIFLS
     GEREIHDTAN ALARRNLDNI KILSLYARLS INEQSNVFRL YQCRRIVLAT NIAETSLTVP
     GIKYVIDPGT ARVRRYSYRR KIHRLHVELI SQSSANQRKG RCGRIENGIC IRLYSEENFK
     LRSKFNTPEI LRSSLASVIL RMVALDLGNI QEFPFIELPD KRNIRDGIQL LEELGAIKSK
     NSSNKWNNSN VEILLTSVGH QLLKLPIELR LARIMLEAAK NACLKEVMII VSALSTQDPR
     EYPLDQKKLS EVKHSRFLHK DSDFLVFINL WKYIQKQKKL LTNTQFRQQC KQNFINYSLV
     QEWQNIYLKL QQIMIKLNFK LNDEVSSYSN IHRSILVGFL SYIGIRDRSK NEYQGVRKIR
     FSIFPASSIF KRQPKWVVSA ELFETSKLWG RIVAKIQPKW IIEIAKHLVR RSYSEPYWSK
     EGEVAMAYEK VVLYGLTILS RNPVDYSAID LSLSREIFLR NALVDGNWKA EHTFLKQNLK
     LRQEIEALEH KLRRRDILLS DAQLFKFYDQ RVAKEVVSGR HFSDWWKKTI KNNSELLQFK
     KQMLFRNDRS DFIASDYPNV WHQNDLSFKL SYKFNPGEDD DGITVNIPLF ILNQVKSEGF
     DWQIPGFRRE LISSLIKTLP KHLRQNLFPI SNYIDDFLVR VIPGQHTILE ALERDLKCIG
     IQVSHHDWNF KKIPEYLKIK FCVLDDKNIR LKVSKDLCNL KENLTGEIQN LLSKVFMNNF
     QKKKLYTWNF NTFPTVFQKK HSDFIVKAYP ALVDNQDSVE IRLFETQKKQ SLVMKSGQLR
     LILLTLSTLL KKHSVNLPNK FKLGIYFRSY GEVFYIVDDC INCTINKLVE EKGGLVWNAL
     DFQSIINYIR IKSSDTFIFI AEQAESILGC VFSINETLKK DSNFINSLAF LDIKNQLDGL
     IFNGFLTKHG WRKLPDILRY VQAIKVRIEK LKINPEKDNF YMSKLELLTK EHKKTLNSIS
     SSIDISDNLK KVRWMLEELR VSYFAQHLGT ASSVSEKKVR KAIDLYLKFK
//
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