ID S3YDR6_9MICO Unreviewed; 387 AA.
AC S3YDR6;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=HTH lacI-type domain-containing protein {ECO:0000259|SMART:SM00354};
GN ORFNames=HMPREF1484_01405 {ECO:0000313|EMBL:EPH15768.1};
OS Dermabacter sp. HFH0086.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Dermabacteraceae;
OC Dermabacter.
OX NCBI_TaxID=1203568 {ECO:0000313|EMBL:EPH15768.1, ECO:0000313|Proteomes:UP000014577};
RN [1] {ECO:0000313|EMBL:EPH15768.1, ECO:0000313|Proteomes:UP000014577}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HFH0086 {ECO:0000313|EMBL:EPH15768.1,
RC ECO:0000313|Proteomes:UP000014577};
RG The Broad Institute Genomics Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T.M., Dai D., Dover J.,
RA Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Dermabacter sp. HFH0086.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPH15768.1}.
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DR EMBL; ATFO01000007; EPH15768.1; -; Genomic_DNA.
DR RefSeq; WP_016664314.1; NZ_KE340308.1.
DR AlphaFoldDB; S3YDR6; -.
DR STRING; 1203568.HMPREF1484_01405; -.
DR PATRIC; fig|1203568.3.peg.1380; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_1_11; -.
DR Proteomes; UP000014577; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF140; LACI-FAMILY TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000014577};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 41..109
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|SMART:SM00354"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 359..387
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 387 AA; 41164 MW; E038C77B930DD93F CRC64;
MNDKARGDIN GDFAPGESPD ELEAAAKVAP EVTEQRSEGD RATLTEVANS LGITAAVALR
ALRGESDINS RLVTSVRETA ERLHYPLEDL AQEDDHRGVV AVLVNTMRNT WISDLVRSIR
IELAATGRHV VVVPTRRRMP EYPVTLEEET ISSLTALGVD GFIMASELPE LDKVFEAIGN
RPLVAIGGSK ERIGKSDTVR IDDEAGFGLL VDHLVSLGHK DIAHVGGVGY AVAKERATAF
KAAMKRHGLE DRARVEPADF SEQVGQTAGA MLLRGSQVPT AITCSNDVTA VGVLSAAADA
GFDVPAQLAV TGYGNTSLAS SGIAQVTSID PNSRRIGALG AQMLVERIGG FEGPARDTAV
SPHLIVRRSS SAGPRPEQQR RKRVTID
//
