ID S3YDU3_9MICO Unreviewed; 836 AA.
AC S3YDU3;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0008006|Google:ProtNLM};
GN ORFNames=HMPREF1484_01430 {ECO:0000313|EMBL:EPH15793.1};
OS Dermabacter sp. HFH0086.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Dermabacteraceae;
OC Dermabacter.
OX NCBI_TaxID=1203568 {ECO:0000313|EMBL:EPH15793.1, ECO:0000313|Proteomes:UP000014577};
RN [1] {ECO:0000313|EMBL:EPH15793.1, ECO:0000313|Proteomes:UP000014577}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HFH0086 {ECO:0000313|EMBL:EPH15793.1,
RC ECO:0000313|Proteomes:UP000014577};
RG The Broad Institute Genomics Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T.M., Dai D., Dover J.,
RA Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Dermabacter sp. HFH0086.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Homohexamer. The oligomerization is ATP-dependent.
CC {ECO:0000256|ARBA:ARBA00026057}.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPH15793.1}.
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DR EMBL; ATFO01000007; EPH15793.1; -; Genomic_DNA.
DR RefSeq; WP_016664339.1; NZ_KE340308.1.
DR AlphaFoldDB; S3YDU3; -.
DR STRING; 1203568.HMPREF1484_01430; -.
DR PATRIC; fig|1203568.3.peg.1407; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_1_11; -.
DR Proteomes; UP000014577; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000014577};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 2..144
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 422..457
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT COILED 418..464
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 836 AA; 91994 MW; C411E8585DB3045A CRC64;
MFERFTDRAR RVIVLAQDEA RLLNHNYIGT EHILLGLIHE GEGVGAKALE SLGITLEGVR
EQVREIITEG TQAPTGHIPF TPRAKKVLEL SLREALQLGH GYIGTEHILL GLLREGDGVA
VKVLTRMGAQ PAAVRQEVIE RLSGYQGKET VNAGGGNQEG TPSGSLVLDQ FGRNLTQAAR
DQELDPVIGR EREAERVMQV LSRRTKNNPV LIGEPGVGKS AVVEGLAQSI VAGDVPETLK
DKQLYTLDLG SLVAGSRYRG DFEERLKKVL KEIKTRGDIV LFIDEIHTLV GAGAAEGAID
AANILKPMLA RGELQTIGAT TLEEYRKHIE KDAALERRFQ PIQVEEPSVE ETIDILRGLR
DRYESFHKVT ITDDALEAAA QLAARYVNDR FLPDKAIDLI DEAGARLRIR RLSAPPELKE
YDQKIEEAKR AKESAIDAQD FEKAASLRDD EQKLTAERKA KEDAWRNGES DSISVVNDDV
IAEVLAAATG IPIVKLNEAE STRLLNMENE LHKRVVGQNE AIKALSQSIR RTRAGLKDPK
RPGGSFIFAG PTGVGKTELA KALAEFLFGD EDALITLDMS EFGEKHTASR LFGSPPGYVG
YDEGGQLTEK VRRKPFSVVL FDEIEKAHVD IFNSLLQILE DGRLTDSQGR VVDFKNTVII
MTTNLGTRDI AKGVSIGFQA GGDLSTSYER MKAKVNEELK QHFRPEFLNR VDDIVVFPQL
SREEIAQIVD LMVGRLDTRL AERGMSVTLT PQARTLLAEK GYDPVLGARP LRRAIQRDIE
DALSEKILFG QVKDGDEIVI DAEGEGPLGI FTFATKNAEG ELEPISEDIS VEDIAG
//