GenomeNet

Database: UniProt
Entry: S5MDD5_9MOLU
LinkDB: S5MDD5_9MOLU
Original site: S5MDD5_9MOLU 
ID   S5MDD5_9MOLU            Unreviewed;       148 AA.
AC   S5MDD5;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   RecName: Full=Large ribosomal subunit protein bL9 {ECO:0000256|ARBA:ARBA00035292, ECO:0000256|HAMAP-Rule:MF_00503};
GN   Name=rplI {ECO:0000256|HAMAP-Rule:MF_00503,
GN   ECO:0000313|EMBL:AGR41728.1};
GN   ORFNames=SDIMI_v3c00240 {ECO:0000313|EMBL:AGR41728.1};
OS   Spiroplasma diminutum CUAS-1.
OC   Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae;
OC   Spiroplasma.
OX   NCBI_TaxID=1276221 {ECO:0000313|EMBL:AGR41728.1, ECO:0000313|Proteomes:UP000014983};
RN   [1] {ECO:0000313|EMBL:AGR41728.1, ECO:0000313|Proteomes:UP000014983}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CUAS-1 {ECO:0000313|EMBL:AGR41728.1};
RX   PubMed=23873917; DOI=10.1093/gbe/evt108;
RA   Lo W.S., Ku C., Chen L.L., Chang T.H., Kuo C.H.;
RT   "Comparison of metabolic capacities and inference of gene content evolution
RT   in mosquito-associated Spiroplasma diminutum and S. taiwanense.";
RL   Genome Biol. Evol. 5:1512-1523(2013).
CC   -!- FUNCTION: Binds to the 23S rRNA. {ECO:0000256|HAMAP-Rule:MF_00503}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bL9 family.
CC       {ECO:0000256|ARBA:ARBA00010605, ECO:0000256|HAMAP-Rule:MF_00503}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP005076; AGR41728.1; -; Genomic_DNA.
DR   RefSeq; WP_020835961.1; NC_021833.1.
DR   AlphaFoldDB; S5MDD5; -.
DR   STRING; 1276221.SDIMI_v3c00240; -.
DR   KEGG; sdi:SDIMI_v3c00240; -.
DR   PATRIC; fig|1276221.3.peg.24; -.
DR   eggNOG; COG0359; Bacteria.
DR   HOGENOM; CLU_078938_3_0_14; -.
DR   InParanoid; S5MDD5; -.
DR   OrthoDB; 9788336at2; -.
DR   Proteomes; UP000014983; Chromosome.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.10.430.100; Ribosomal protein L9, C-terminal domain; 1.
DR   Gene3D; 3.40.5.10; Ribosomal protein L9, N-terminal domain; 1.
DR   HAMAP; MF_00503; Ribosomal_L9; 1.
DR   InterPro; IPR000244; Ribosomal_bL9.
DR   InterPro; IPR009027; Ribosomal_bL9/RNase_H1_N.
DR   InterPro; IPR020594; Ribosomal_bL9_bac/chp.
DR   InterPro; IPR020069; Ribosomal_bL9_C.
DR   InterPro; IPR036791; Ribosomal_bL9_C_sf.
DR   InterPro; IPR020070; Ribosomal_bL9_N.
DR   InterPro; IPR036935; Ribosomal_bL9_N_sf.
DR   NCBIfam; TIGR00158; L9; 1.
DR   PANTHER; PTHR21368:SF18; 39S RIBOSOMAL PROTEIN L9, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR21368; 50S RIBOSOMAL PROTEIN L9; 1.
DR   Pfam; PF03948; Ribosomal_L9_C; 1.
DR   Pfam; PF01281; Ribosomal_L9_N; 1.
DR   SUPFAM; SSF55658; L9 N-domain-like; 1.
DR   SUPFAM; SSF55653; Ribosomal protein L9 C-domain; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Reference proteome {ECO:0000313|Proteomes:UP000014983};
KW   Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW   Rule:MF_00503};
KW   Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW   Rule:MF_00503};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW   Rule:MF_00503};
KW   rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW   Rule:MF_00503}.
FT   DOMAIN          1..46
FT                   /note="Ribosomal protein L9"
FT                   /evidence="ECO:0000259|Pfam:PF01281"
FT   DOMAIN          64..145
FT                   /note="Large ribosomal subunit protein bL9 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03948"
FT   COILED          51..85
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   148 AA;  17019 MW;  92CC5478195F7408 CRC64;
     MKVILLVDVK NYGKKDEIVN VSDGYATNFL IPKGLAILAT KDDVSHLNVR KRKEEEIKNE
     KQAEINSLKE KIESLQLNFK IKTKDGKPFG SVSLSQITDR IKKEFSFDLD KRKFEKHESL
     NKLGLFYLKI KLDFKVVATL KVFVEGTE
//
DBGET integrated database retrieval system