ID S5R7I4_CARRU Unreviewed; 356 AA.
AC S5R7I4;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=RNA polymerase sigma70 factor {ECO:0000313|EMBL:AGS06560.1};
GN Name=rpoD {ECO:0000313|EMBL:AGS06560.1};
GN ORFNames=CRDC_00370 {ECO:0000313|EMBL:AGS06560.1};
OS Candidatus Carsonella ruddii DC.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Halomonadaceae; Zymobacter group; Candidatus Carsonella.
OX NCBI_TaxID=667013 {ECO:0000313|EMBL:AGS06560.1, ECO:0000313|Proteomes:UP000015332};
RN [1] {ECO:0000313|EMBL:AGS06560.1, ECO:0000313|Proteomes:UP000015332}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DC {ECO:0000313|EMBL:AGS06560.1,
RC ECO:0000313|Proteomes:UP000015332};
RX PubMed=23850282; DOI=10.1016/j.cub.2013.06.027;
RA Nakabachi A., Ueoka R., Oshima K., Teta R., Mangoni A., Gurgui M.,
RA Oldham N.J., van Echten-Deckert G., Okamura K., Yamamoto K., Inoue H.,
RA Ohkuma M., Hongoh Y., Miyagishima S.Y., Hattori M., Piel J., Fukatsu T.;
RT "Defensive bacteriome symbiont with a drastically reduced genome.";
RL Curr. Biol. 23:1478-1484(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP003467; AGS06560.1; -; Genomic_DNA.
DR AlphaFoldDB; S5R7I4; -.
DR SMR; S5R7I4; -.
DR KEGG; cri:CRDC_00370; -.
DR PATRIC; fig|667013.4.peg.64; -.
DR HOGENOM; CLU_879059_0_0_6; -.
DR Proteomes; UP000015332; Chromosome.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS00716; SIGMA70_2; 1.
PE 4: Predicted;
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023082};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
FT DOMAIN 310..336
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00716"
SQ SEQUENCE 356 AA; 43395 MW; 3FB635CA2503F934 CRC64;
MIINFLLKNK NLNFLLKKIK KHFLIIFKYI INKKYNIKKK NYIKININKN LFIKKKKINN
IINYLIINFF IVEKVIKKIL FSLYKIIIKK KRILIEKFSN FCRKNLFLYK KKLSINIFIK
IFKNFFSFIK NNIIVIKNNV SIFKKKINNY IEIKNYIEII YLTYVSEKLS DKIAKNNIKI
LKKIIKKYRK KQIYNDLYQE CYSEFVKIIN NFRLSKKNFF RFCYWKIKKK MISIINLKKI
ELKKNLISVD KPLFNHSLKY HISDRSKFLI LEFARIELKN LIRNLIINLP EREQKIIRLR
FGIGVSKNYT LEEIGQLYSL SRERIRQIEL NVILKMRQSV VVGILQPYIK VFKLLE
//
