ID S6GMW6_9GAMM Unreviewed; 152 AA.
AC S6GMW6;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN Name=rimP {ECO:0000256|HAMAP-Rule:MF_01077};
GN ORFNames=OFPI_19400 {ECO:0000313|EMBL:EPJ50786.1};
OS Osedax symbiont Rs2.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae.
OX NCBI_TaxID=1330035 {ECO:0000313|EMBL:EPJ50786.1, ECO:0000313|Proteomes:UP000014830};
RN [1] {ECO:0000313|EMBL:EPJ50786.1, ECO:0000313|Proteomes:UP000014830}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Rs2 {ECO:0000313|Proteomes:UP000014830};
RA Yi H., Goffredi S.;
RT "Comparative genomics of two novel heterotrophic symbionts of deep-sea
RT Osedax worms: functional variation and environmental selection.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Required for maturation of 30S ribosomal subunits.
CC {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01077}.
CC -!- SIMILARITY: Belongs to the RimP family. {ECO:0000256|HAMAP-
CC Rule:MF_01077}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPJ50786.1}.
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DR EMBL; ASZI01000138; EPJ50786.1; -; Genomic_DNA.
DR AlphaFoldDB; S6GMW6; -.
DR PATRIC; fig|1330035.3.peg.1846; -.
DR Proteomes; UP000014830; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042274; P:ribosomal small subunit biogenesis; IEA:UniProtKB-UniRule.
DR CDD; cd01734; YlxS_C; 1.
DR Gene3D; 2.30.30.180; Ribosome maturation factor RimP, C-terminal domain; 1.
DR Gene3D; 3.30.300.70; RimP-like superfamily, N-terminal; 1.
DR HAMAP; MF_01077; RimP; 1.
DR InterPro; IPR003728; Ribosome_maturation_RimP.
DR InterPro; IPR028998; RimP_C.
DR InterPro; IPR036847; RimP_C_sf.
DR InterPro; IPR028989; RimP_N.
DR InterPro; IPR035956; RimP_N_sf.
DR PANTHER; PTHR33867; RIBOSOME MATURATION FACTOR RIMP; 1.
DR PANTHER; PTHR33867:SF1; RIBOSOME MATURATION FACTOR RIMP; 1.
DR Pfam; PF17384; DUF150_C; 1.
DR Pfam; PF02576; RimP_N; 1.
DR SUPFAM; SSF74942; YhbC-like, C-terminal domain; 1.
DR SUPFAM; SSF75420; YhbC-like, N-terminal domain; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_01077};
KW Reference proteome {ECO:0000313|Proteomes:UP000014830};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_01077}.
FT DOMAIN 11..83
FT /note="Ribosome maturation factor RimP N-terminal"
FT /evidence="ECO:0000259|Pfam:PF02576"
FT DOMAIN 86..151
FT /note="Ribosome maturation factor RimP C-terminal"
FT /evidence="ECO:0000259|Pfam:PF17384"
SQ SEQUENCE 152 AA; 17201 MW; 1FDA97B7F8034F25 CRC64;
MSAKLKRLQE MLEPIAQSMD FELWGIEYLS QGKDSILRIY IDGENGVSVD DCAQMSHQAS
GILDVEDTIA GHYALEVSSP GMDRLLFKLE HYVAFTGSVV KIKLRMPFDG RRNFKGLLKG
VEGDEVVLEV DNEEYLLPID YIDKAQIEPQ FK
//
