ID S6GPJ5_9GAMM Unreviewed; 522 AA.
AC S6GPJ5;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=OFPII_04420 {ECO:0000313|EMBL:EPJ48772.1};
OS Osedax symbiont Rs1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae.
OX NCBI_TaxID=1330036 {ECO:0000313|EMBL:EPJ48772.1, ECO:0000313|Proteomes:UP000014822};
RN [1] {ECO:0000313|EMBL:EPJ48772.1, ECO:0000313|Proteomes:UP000014822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Rs1 {ECO:0000313|Proteomes:UP000014822};
RA Yi H., Goffredi S.;
RT "Comparative genomics of two novel heterotrophic symbionts of deep-sea
RT Osedax worms: functional variation and environmental selection.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPJ48772.1}.
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DR EMBL; ASZJ01000024; EPJ48772.1; -; Genomic_DNA.
DR AlphaFoldDB; S6GPJ5; -.
DR Proteomes; UP000014822; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF95; TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000014822};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 198..427
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 446..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 522 AA; 58125 MW; 98C26B56DC99D030 CRC64;
MLTPVVSQLM PLLKAADETA LDLAGLQLWC QHVRAVRGWY LRLSFDGREL QVMAQLERGQ
VSVAAGLSFN CTQFDQPFSH VAFSAKSIVL QQLAQYPELS HPQYLTWIAS ASAQTELWVE
PLYLNGKLQG LWATQAVAGQ TCPSSDTQAI KQLMLLRIEQ LKQNRQIQVN HSSLVSSFNA
LHADVLTGKH KKILAQTIIG ESEQIQKLQD KIIIAARSQL SVLVQGETGV GKELVAKAIH
QLSDREQRPF IALNCAAIPD SLLESELFGF VKGAFSGAAH CSKGLLGQSH SGVLFLDEIG
DMPLTIQAKL LRVLETRKYR QLGGSEELSC DFKLITATHH HLPLLIKQQR FRSDLFYRLN
SFPILVVPLR QRKADIELLS QYFIDQYNRA NQCRVLGISE AAIEQLNTLS FNGNIRELKN
IIELACVHCG DGEEIHSIDL SNTEFPSAAD SEEQDSQSPA EPAHKPGEIS NLKAAVEQFE
EQIIKQRLLL CDGNKSKAAQ TLGVPRRTFT YICQRLELNN SE
//
