GenomeNet

Database: UniProt
Entry: S8E9G8_9LAMI
LinkDB: S8E9G8_9LAMI
Original site: S8E9G8_9LAMI 
ID   S8E9G8_9LAMI            Unreviewed;       441 AA.
AC   S8E9G8;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   13-SEP-2023, entry version 34.
DE   RecName: Full=UBC core domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=M569_02250 {ECO:0000313|EMBL:EPS72508.1};
OS   Genlisea aurea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea.
OX   NCBI_TaxID=192259 {ECO:0000313|EMBL:EPS72508.1, ECO:0000313|Proteomes:UP000015453};
RN   [1] {ECO:0000313|EMBL:EPS72508.1, ECO:0000313|Proteomes:UP000015453}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23855885;
RA   Leushkin E.V., Sutormin R.A., Nabieva E.R., Penin A.A., Kondrashov A.S.,
RA   Logacheva M.D.;
RT   "The miniature genome of a carnivorous plant Genlisea aurea contains a low
RT   number of genes and short non-coding sequences.";
RL   BMC Genomics 14:476-476(2013).
CC   -!- SIMILARITY: Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11
CC       RNA polymerase family. {ECO:0000256|RuleBase:RU003474}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EPS72508.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AUSU01000810; EPS72508.1; -; Genomic_DNA.
DR   AlphaFoldDB; S8E9G8; -.
DR   OrthoDB; 180749at2759; -.
DR   Proteomes; UP000015453; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IEA:UniProt.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00195; UBCc; 1.
DR   CDD; cd10508; Zn-ribbon_RPB9; 1.
DR   Gene3D; 2.20.25.10; -; 2.
DR   Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 1.
DR   InterPro; IPR001529; DNA-dir_RNA_pol_M/15kDasu.
DR   InterPro; IPR012164; Rpa12/Rpb9/Rpc10/TFS.
DR   InterPro; IPR000608; UBQ-conjugat_E2.
DR   InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR   InterPro; IPR034012; Zn_ribbon_RPB9_C.
DR   InterPro; IPR001222; Znf_TFIIS.
DR   PANTHER; PTHR11239; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR11239:SF1; DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9; 1.
DR   Pfam; PF01096; TFIIS_C; 1.
DR   Pfam; PF00179; UQ_con; 1.
DR   SMART; SM00661; RPOL9; 1.
DR   SMART; SM00212; UBCc; 1.
DR   SMART; SM00440; ZnF_C2C2; 1.
DR   SUPFAM; SSF54495; UBC-like; 1.
DR   SUPFAM; SSF57783; Zinc beta-ribbon; 2.
DR   PROSITE; PS50127; UBC_2; 1.
DR   PROSITE; PS51133; ZF_TFIIS_2; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU003474};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW   ECO:0000256|RuleBase:RU003474};
KW   Reference proteome {ECO:0000313|Proteomes:UP000015453};
KW   Transcription {ECO:0000256|RuleBase:RU003474};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00472}.
FT   TRANSMEM        407..424
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          84..136
FT                   /note="TFIIS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51133"
FT   DOMAIN          155..303
FT                   /note="UBC core"
FT                   /evidence="ECO:0000259|PROSITE:PS50127"
FT   REGION          320..385
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        320..347
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        352..368
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        369..385
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   441 AA;  49597 MW;  91847A5C41CFCF1D CRC64;
     MMVLPIKIPA AGTGVERKGF RDNNILYPKE EKDQKILLYA CRNCDHQEVA ENNCVYRNEI
     HHSVGERTQV LQDVAADPTL PRTKSVRCSA CGHGEAVFFQ ATARGEEGMT LFFVCCNPNF
     FQLSPQFSCL LPRREREGGI LEEVLMMDKF NRRNPSVLRI MQEIKEMQTN SSDDFMCLPL
     EDDIFEWQFA IMGPRDTEFE GGIYHGRIQL PVEYPLKPPS FMLLTPSGRF ETQTKICLSI
     SNHHPEHWQP SWSVRTALVA LIAFMPTPPN GALGSLDYTK EERKALAIKS REIVPKYGSP
     ERQKLIDEIH EYMLSKTLTV PQGDQESEVQ ASGEVDNNVQ LNPSEDIAEE NAENIPPAEE
     EDEINEEASE INSTPNVSHA STSASEQQNL LIKPVTRASP KQADDRILTW AALVLSIAIV
     VLLLKKFLNA NGHSGVFLDE S
//
DBGET integrated database retrieval system