ID S9SC60_9RHOB Unreviewed; 959 AA.
AC S9SC60;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=ATPase with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:EPX87700.1};
GN ORFNames=ruthe_00273 {ECO:0000313|EMBL:EPX87700.1};
OS Rubellimicrobium thermophilum DSM 16684.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Rubellimicrobium.
OX NCBI_TaxID=1123069 {ECO:0000313|EMBL:EPX87700.1, ECO:0000313|Proteomes:UP000015346};
RN [1] {ECO:0000313|EMBL:EPX87700.1, ECO:0000313|Proteomes:UP000015346}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16684 {ECO:0000313|EMBL:EPX87700.1,
RC ECO:0000313|Proteomes:UP000015346};
RX PubMed=24501632; DOI=10.4056/sigs.4247911;
RA Fiebig A., Riedel T., Gronow S., Petersen J., Klenk H.P., Goker M.;
RT "Genome sequence of the reddish-pigmented Rubellimicrobium thermophilum
RT type strain (DSM 16684(T)), a member of the Roseobacter clade.";
RL Stand. Genomic Sci. 8:480-490(2013).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPX87700.1}.
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DR EMBL; AOLV01000004; EPX87700.1; -; Genomic_DNA.
DR RefSeq; WP_021096385.1; NZ_KE557320.1.
DR AlphaFoldDB; S9SC60; -.
DR STRING; 1123069.ruthe_00273; -.
DR PATRIC; fig|1123069.3.peg.236; -.
DR HOGENOM; CLU_005070_4_2_5; -.
DR OrthoDB; 9803641at2; -.
DR Proteomes; UP000015346; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 4.10.860.10; UVR domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001943; UVR_dom.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF145; CLPA/B PROTEASE ATP BINDING SUBUNIT-RELATED; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
DR PROSITE; PS50151; UVR; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000313|EMBL:EPX87700.1};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022881};
KW DNA excision {ECO:0000256|ARBA:ARBA00022769};
KW DNA repair {ECO:0000256|ARBA:ARBA00022881};
KW Excision nuclease {ECO:0000256|ARBA:ARBA00022881};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000015346};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 115..255
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT DOMAIN 528..563
FT /note="UVR"
FT /evidence="ECO:0000259|PROSITE:PS50151"
FT REGION 918..959
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 524..574
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 938..959
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 959 AA; 105768 MW; D8BF2942313597DF CRC64;
MANGTCDICG RPATARVRAS INGRVQNMEL CDQHYREMVR RSGRSASPLE SLFGRHSLFD
EFFGDGAFGR LFGDSPLRSG SPGLASAGDD DVVDATFGDD TPRRGVRRGA GRSIADRLSE
QGNKLLQEAA QKAGEFGRSE VDTEHLLLAL TGSEVVRTVL GQFKVDVEDL RRQIEKDAKR
GDAKGSGEIG VSPRLKDALN RAFIASNELG HSYVGPEHLL IGLAEEGEGL AAAILRKYGL
TPQALRQQVT KVVGKGAEEG RVEAPSSTPD LDQFSRDLTR LAREGKLDPV IGRAREIETT
IEVLARRKKN NPVLIGEPGV GKTAIVEGLA QRIVAGEVPE ALRDKRLVEL NINAMVAGSK
YRGEFEERVQ KILKEITEEK DRLILFIDEI HTIVGAGQGG GEGGLDIANT FKPALARGEL
NLIGATTLNE YQKYIEKDAA LERRFQPVYV EEPTIAQTIM ILRGLRDTLE AHHKVTITDE
AIVAAAELSD RYITGRFMPD KAIDLIDQAA ARVKISATAR PVDVQELEAE VAQLRREQDY
AAARRQFERA AELKKELEQK QKELDELLEV WKRDRASATA EVRADHVAQV VSKITGVPVT
ELTTEEKDKL LKLEEKLHER VIGQDEAIRA VADAVRLARA GLREGRGPTA TFLFLGPTGV
GKTELAKTLA EVIFGDQDAM IRIDMSEYGE RHSVARLVGA PPGYVGYEEG GQLTEKVRRR
PYAVVLLDEI EKAHPDVYNI LLQVFDDGRL TDGKGRVVDF TNTIIIATSN LGADIIQRNL
RKRGTSEFDE ARQKAELMEV LRGHFRPEFI NRIDEIIVFH SLNQSEIRQI VELQLNRVKR
TALTQGVELD FDVSVVDHFG AVGFRPEFGA RELRRLIRSE LETELAREML SGRIEDGDKV
RVAWSPDAQK VVFEKIAKEP GDAKPDDQAA AAEKADAAAS DVVDDDKDEA QSKDDKPTG
//