ID S9W0W8_SCHCR Unreviewed; 593 AA.
AC S9W0W8;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=RNA-binding protein {ECO:0000313|EMBL:EPY51690.1};
GN ORFNames=SPOG_00115 {ECO:0000313|EMBL:EPY51690.1};
OS Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 /
OS NBRC 106824 / NRRL Y48691) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=653667 {ECO:0000313|EMBL:EPY51690.1, ECO:0000313|Proteomes:UP000015464};
RN [1] {ECO:0000313|EMBL:EPY51690.1, ECO:0000313|Proteomes:UP000015464}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691
RC {ECO:0000313|Proteomes:UP000015464};
RX PubMed=21511999; DOI=10.1126/science.1203357;
RA Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N.,
RA Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y.,
RA Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., Bayne E.H.,
RA Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G.,
RA French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A.,
RA Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P.,
RA Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R.,
RA Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J.,
RA Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W.,
RA Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.;
RT "Comparative functional genomics of the fission yeasts.";
RL Science 332:930-936(2011).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KE546990; EPY51690.1; -; Genomic_DNA.
DR RefSeq; XP_013023076.1; XM_013167622.1.
DR AlphaFoldDB; S9W0W8; -.
DR STRING; 653667.S9W0W8; -.
DR EnsemblFungi; EPY51690; EPY51690; SPOG_00115.
DR GeneID; 25034447; -.
DR eggNOG; KOG4198; Eukaryota.
DR HOGENOM; CLU_022834_1_0_1; -.
DR OMA; NLDRYVV; -.
DR OrthoDB; 228305at2759; -.
DR Proteomes; UP000015464; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0140453; C:protein aggregate center; IEA:EnsemblFungi.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0071502; P:cellular response to temperature stimulus; IEA:EnsemblFungi.
DR GO; GO:0031445; P:regulation of heterochromatin formation; IEA:EnsemblFungi.
DR CDD; cd12452; RRM_ARP_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 3.
DR InterPro; IPR034351; Nrp1_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR23111:SF40; RNA-BINDING PROTEIN INVOLVED IN HETEROCHROMATIN ASSEMBLY-RELATED; 1.
DR PANTHER; PTHR23111; ZINC FINGER PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00641; zf-RanBP; 2.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00547; ZnF_RBZ; 3.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 2.
DR PROSITE; PS50199; ZF_RANBP2_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000015464};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 236..314
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 335..364
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 436..467
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
SQ SEQUENCE 593 AA; 65302 MW; 357C01FC78F89BF1 CRC64;
MPLPESVGDL VVLHFETNLD DHGISIGRAP CEIHEICWVI LDGKTLEKQH CESCSIREES
SKDGICGTVS SLQEAIQYVD NSIQERLNLQ EKPFTFVVMN GRELRVLLPK EAKDHGVILP
SYMRHPRLFD LSSEYAKWQI RSGSVPPYTI TLSHIFGKLD VDSLPPINEC KTIQLSPTEV
PYITKGLTQC WRLANATTLL LRKIEREARL PSFPNVLTQP IDCQADARLF YLERSKVVHI
GGLTNDVTQS ELEGWFTNHG IHPIALWTLK TPEPYKSTGT GFVLFGSHED ASDALGLNGL
CIGDRMLAIT PSCPKVLDKA SEILIPFPSS KNRPRPGDWN CPMCGFSNFQ RRISCFRCSF
PGPGHASATA ATSSFPPEFP YGQSYGNGNS HIPHNYGFGI HHANEVNSQA DQHHNATNIV
NNHSSRSTFG GNVPFRAGDW KCGSEGCGYH NFAKNVCCLR CGASRATAAV VADHTSMSSN
ANNNTNGNYP STSSGVFGTS PTNACVYPYS QLSLGSIAAN NHPYPNPNAN RPEEQNRFKD
VPKASFATDQ GDWLCECGFT NFRRRSNCLR CNAPHYPNLQ GPSSFPADFG TYA
//
