ID T0J660_9SPHN Unreviewed; 809 AA.
AC T0J660;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Type VI secretion protein {ECO:0000313|EMBL:EQB17429.1};
GN ORFNames=L284_08535 {ECO:0000313|EMBL:EQB17429.1};
OS Novosphingobium lindaniclasticum LE124.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1096930 {ECO:0000313|EMBL:EQB17429.1, ECO:0000313|Proteomes:UP000015527};
RN [1] {ECO:0000313|EMBL:EQB17429.1, ECO:0000313|Proteomes:UP000015527}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LE124 {ECO:0000313|EMBL:EQB17429.1,
RC ECO:0000313|Proteomes:UP000015527};
RX PubMed=24029761;
RA Saxena A., Nayyar N., Sangwan N., Kumari R., Khurana J.P., Lal R.;
RT "Genome Sequence of Novosphingobium lindaniclasticum LE124T, Isolated from
RT a Hexachlorocyclohexane Dumpsite.";
RL Genome Announc. 1:e00715-13(2013).
CC -!- SIMILARITY: Belongs to the TrbE/VirB4 family.
CC {ECO:0000256|ARBA:ARBA00006512}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQB17429.1}.
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DR EMBL; ATHL01000056; EQB17429.1; -; Genomic_DNA.
DR RefSeq; WP_021233610.1; NZ_ATHL01000056.1.
DR AlphaFoldDB; T0J660; -.
DR PATRIC; fig|1096930.3.peg.1689; -.
DR eggNOG; COG3451; Bacteria.
DR OrthoDB; 9816422at2; -.
DR Proteomes; UP000015527; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR004346; CagE_TrbE_VirB.
DR InterPro; IPR018145; CagE_TrbE_VirB_cntrl_dom.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR043964; P-loop_TraG.
DR NCBIfam; TIGR00929; VirB4_CagE; 1.
DR PANTHER; PTHR30121:SF6; TYPE IV SECRETION SYSTEM PROTEIN CAGE; 1.
DR PANTHER; PTHR30121; UNCHARACTERIZED PROTEIN YJGR-RELATED; 1.
DR Pfam; PF03135; CagE_TrbE_VirB; 1.
DR Pfam; PF19044; P-loop_TraG; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000015527};
KW Virulence {ECO:0000256|ARBA:ARBA00023026}.
FT DOMAIN 187..391
FT /note="CagE TrbE VirB component of type IV transporter
FT system central"
FT /evidence="ECO:0000259|Pfam:PF03135"
FT DOMAIN 577..728
FT /note="TraG P-loop"
FT /evidence="ECO:0000259|Pfam:PF19044"
FT COILED 290..317
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 809 AA; 88398 MW; 60BBCBDAA6320F8F CRC64;
MSKSKKSAHK GALGGWAAKE TLVGDRLPYQ ALVDENVVLL RDGSVMLSLM VPGFAFETAD
SEELNAHVAT REVLLRSSLD ARFVLYHHVI RRRVQIALEG QFEDPLAAHI DARWRARTGS
GALFVNDQFV TLVRRPARGK AGWPDKLSRM LRNKGSAPAE ADPADVRALR AAASAMVASL
GAYGARLLGD YEGQAGPCSE VLELLSALYN GEMRPVRKPV DGTDIGHMLP YRRINFGMDA
LELRGAAGAS FGSMVSLKDY PDSTAPGLTD PLLRLPCELV LTETYAPSDR QIARERIDLA
IRRLRSADEE AMAERREMSS ARDSLGTGAV GFGDHHLSVL VRADTLDALD EVTALCAASL
ADAGAVAVRE DVNMEPAFWG QLPGNEGFIV RRALISSANM ACFGSLHGFA MGQASGNHWG
DAVTLLATTS ATPFFFNFHQ GDLGNFTVIG PSGSGKTVVM NFLAAQAQKF SPRTVLFDKD
RGAEVFLRGI GGTYSRVAAG HPTGFNPLSL PDTAANRAFL RDWLGVLLEA RGPEELSTIA
GAVDAAYHND PSLRRLSHFR ELLAGARRPE PGDLASRLDA WLQGGEHGWL FDNQHDRLDL
SSRVLGFDMT ALLESPRLRT PVMMYLFHRI DERLDGEPTM ILIDEGWKAL DDEVFAARIR
DWLKTLRKRN ALVGFATQSA RDALDSKIAT ALVEQTATMV FMPNARARYE DYCEGFGLSQ
HELDVIKTLP AQSRCFLIRQ SDASVVVRLD LSGMPEVLTV LSGRESTVRK LDQLRERYGD
DPAAWYPVLT GLPWPGEADD EAAWIEAAE
//
