ID T0Q0I8_SAPDV Unreviewed; 1005 AA.
AC T0Q0I8;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=RanBP-type and C3HC4-type zinc finger-containing protein 1 {ECO:0000256|ARBA:ARBA00017887};
GN ORFNames=SDRG_10961 {ECO:0000313|EMBL:EQC31359.1};
OS Saprolegnia diclina (strain VS20).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales; Saprolegniaceae;
OC Saprolegnia.
OX NCBI_TaxID=1156394 {ECO:0000313|EMBL:EQC31359.1, ECO:0000313|Proteomes:UP000030762};
RN [1] {ECO:0000313|EMBL:EQC31359.1, ECO:0000313|Proteomes:UP000030762}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VS20 {ECO:0000313|EMBL:EQC31359.1,
RC ECO:0000313|Proteomes:UP000030762};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Nusbaum C., Tyler B., van West P., Dieguez-Uribeondo J.,
RA de Bruijn I., Tripathy S., Jiang R., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Chapman S.B., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A., Murphy C.,
RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Saprolegnia declina VS20.";
RL Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JH767169; EQC31359.1; -; Genomic_DNA.
DR RefSeq; XP_008615200.1; XM_008616978.1.
DR AlphaFoldDB; T0Q0I8; -.
DR STRING; 1156394.T0Q0I8; -.
DR EnsemblProtists; EQC31359; EQC31359; SDRG_10961.
DR GeneID; 19951688; -.
DR VEuPathDB; FungiDB:SDRG_10961; -.
DR eggNOG; KOG1001; Eukaryota.
DR InParanoid; T0Q0I8; -.
DR OMA; KVEPWSN; -.
DR OrthoDB; 200191at2759; -.
DR Proteomes; UP000030762; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF22; DNA REPAIR PROTEIN RAD5; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000030762};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00322}.
FT DOMAIN 1..28
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 399..569
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 765..803
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 837..988
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 34..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1005 AA; 111087 MW; DA42A33561197991 CRC64;
MDWACVNCSF ENPPQAARCE ICRSTRPGAV EFGSAKRARA SPTPTRGKKK TKAATLTSST
FFREDARQLE KKLQQMRECL GNGVSDEEMR RLLQKNAGSV SFSIAAYYEQ ASRQEAATAD
SDATYWTRSM EPSMYYLGVA TADASVTRRD DRSIKAGARF HLQVEGSNMV RVVTMSGNVV
VGRMDEAWEE MLAVLLAARL VAVGATIVEA PFESAVFARF QVQLFVFAAP AFWSTLEKTP
LTYGDQRNKE KAFLLLELLG SPKKSILTPS TTLVLPGETF EKMADDVSVD VLYRTSISPH
DAIPGYSAEA VHATMHNITL RSYQEEALRW MLFRELNHDA LSDSHLIGQA LRLDGASVSL
DESPSTMHPL WSTRTCTRHG ATVPYYVNVF ERLAALTPPA PPVPCRGGIL ADDMGMGKTI
MVLALVAARA KLHTADFTPA HAWGRTRAKT LVVCPLSLLH QWKQEFETRA PSLRVALFYD
APKKSVVSVD TDVILTTYGV LSSEKESALH AFHWDRLILD EAHSIKNRST AYFKSCAALS
ATHRWCLTGT PIQNSLEDIL SLLVFLQYQP WDRTEWWNRV VAQPYEKGQQ CALLRLQAIL
APILLRRTKA TRDSSTGELI VQLPPKRIEV VRLAFSAEER QFYKAVYAKS RGEFYGYVES
GNAMASYVAI FALLLRLRQA CDHPFLVMGK TEVQKTVAQK KKAAATATKH ATNADYYAEL
TAILQQSSSE SSSAATTSTA NSSEDTYISS RILEIQDEGL DCQECPVCLD VPQSPVLTPC
AHLLCHECVR AALETAPVCP VCRADVGLDQ LIPITPPERA DVTPSSGESA GSTKMRQLLR
DLEALRASEP HRKVVVFSQW THMLDLVGST LNQHGFSTVR FDGSLKQDER ERVLLEFSRG
SANVLVISLK AGGVGLNLTA ASVVVLLDPW WNPALEDQAI DRVHRLGQEH DVIVKKYVVD
DTVEDMILQL QERKATMAST VLATSKPGAD SDGRLGLADL LKFFR
//
