ID T0SID6_SAPDV Unreviewed; 994 AA.
AC T0SID6;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE RecName: Full=Nuclear pore complex protein {ECO:0000256|RuleBase:RU365072};
GN ORFNames=SDRG_00410 {ECO:0000313|EMBL:EQC42682.1};
OS Saprolegnia diclina (strain VS20).
OC Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales; Saprolegniaceae;
OC Saprolegnia.
OX NCBI_TaxID=1156394 {ECO:0000313|EMBL:EQC42682.1, ECO:0000313|Proteomes:UP000030762};
RN [1] {ECO:0000313|EMBL:EQC42682.1, ECO:0000313|Proteomes:UP000030762}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VS20 {ECO:0000313|EMBL:EQC42682.1,
RC ECO:0000313|Proteomes:UP000030762};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Nusbaum C., Tyler B., van West P., Dieguez-Uribeondo J.,
RA de Bruijn I., Tripathy S., Jiang R., Young S.K., Zeng Q., Gargeya S.,
RA Fitzgerald M., Haas B., Abouelleil A., Alvarado L., Arachchi H.M.,
RA Berlin A., Chapman S.B., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Larimer J., McCowen C., Montmayeur A., Murphy C.,
RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Saprolegnia declina VS20.";
RL Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBUNIT: Part of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|RuleBase:RU365072}. Nucleus membrane
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SIMILARITY: Belongs to the nucleoporin Nup84/Nup107 family.
CC {ECO:0000256|RuleBase:RU365072}.
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DR EMBL; JH767132; EQC42682.1; -; Genomic_DNA.
DR RefSeq; XP_008604105.1; XM_008605883.1.
DR AlphaFoldDB; T0SID6; -.
DR STRING; 1156394.T0SID6; -.
DR EnsemblProtists; EQC42682; EQC42682; SDRG_00410.
DR GeneID; 19941137; -.
DR VEuPathDB; FungiDB:SDRG_00410; -.
DR eggNOG; KOG1964; Eukaryota.
DR InParanoid; T0SID6; -.
DR OMA; CIRLGQS; -.
DR OrthoDB; 2718743at2759; -.
DR Proteomes; UP000030762; Unassembled WGS sequence.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0031080; C:nuclear pore outer ring; IEA:UniProtKB-UniRule.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:UniProtKB-UniRule.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0006606; P:protein import into nucleus; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.3450.20; -; 1.
DR Gene3D; 1.20.190.50; -; 1.
DR InterPro; IPR007252; Nup84/Nup107.
DR PANTHER; PTHR13003:SF2; NUCLEAR PORE COMPLEX PROTEIN NUP107; 1.
DR PANTHER; PTHR13003; NUP107-RELATED; 1.
DR Pfam; PF04121; Nup84_Nup100; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|RuleBase:RU365072};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|RuleBase:RU365072};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365072};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000030762};
KW Translocation {ECO:0000256|ARBA:ARBA00023010,
KW ECO:0000256|RuleBase:RU365072};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|RuleBase:RU365072}.
SQ SEQUENCE 994 AA; 109956 MW; 9C7556FDF7910113 CRC64;
MAQRTSDLIL AAESSLAFLA QLQEEEERHE ASTVEDVDMT SYEPVATRPE ASRAAKAAAL
LDELEAASVE KSVKKGMAHV KVQFPDRSVE YVDVDAATTT IGHVLYLAWA KRQSTPKPSD
APRFVGLFQG QEVPSDWVLL DCGLALEGTL HLQLASSSRS PKANMRSHDH ATISSISNAY
TTQSNDNDNT YSNPTMHRAT WMEHSVRPEE EAFATALDQL YTKLEMVEDP NQLCQQVLSQ
YVEILQNEIE ARVKAGVPSS SSSTPAPFSL QHGFSFQNKQ PDPSVLLNEL KNERNTWRLL
YELRELSILK NDDLCVLQTS SQLPLTASST ELDAIAALEN RNKLYALQKT VLKWLEAVAA
ENVEATTEKR HMHARTLKQL QRQRRSSVVC AMDPDGPLRE GDSYVDDDDA EDELDLLTSV
WRLLRAGKPR EAADLCIQLG QPWRAASLAG GEVNGACEGD DGVTRWGNPY RMLWKQMCWQ
LSDANATASM AKTTSLQARE LERIVYAALS GNANVLLSSP TCACWEDHVW ALTKAAVGHI
EDDAISHLLE LKAQSTSLAL ELNTDHMRLY RSFLTSTKAI GGRYISSMDA LFADVSGSAN
AVVREQAMHP HRRIQAKLVA SRVDVIVRDI LAGLVDTDAE PFSWDLGLNV PSTHRASPQL
LRFGAHFVLF LQTTGEVFDV NAGHKVLKAY LRHLVQHKHF KLVALYASSL PEDARGAVYA
QCVTMVPSHA CLASIAPFCP PPLFAHVAKT AAEARMTMPN ASDAMRIGAL EILCYDESHR
AEAVVQANLL ARRFVLEDKH SSLKPLLAAL PVDTLALLDQ VDFGDRADEL RRTVREHLAW
KAYVEATEAY DAWRSLVGAR CAVHCFSEEE AEVKTLLFRA SVALAALTDV LHFEHGWLLH
SAIDNADALR ARCLPSLVFS AHRVQMETLA AIERLQFYPA AAIPTMTRPL ARDALQLADV
VADEHYSVYK AFSTTEMRHL LTLLQQSALA HLSP
//