ID T1DUR4_9HELI Unreviewed; 1185 AA.
AC T1DUR4;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=IcmF-related protein {ECO:0000313|EMBL:GAD17877.1};
GN ORFNames=HFN_0692 {ECO:0000313|EMBL:GAD17877.1};
OS Helicobacter fennelliae MRY12-0050.
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC Helicobacteraceae; Helicobacter.
OX NCBI_TaxID=1325130 {ECO:0000313|EMBL:GAD17877.1, ECO:0000313|Proteomes:UP000018143};
RN [1] {ECO:0000313|EMBL:GAD17877.1, ECO:0000313|Proteomes:UP000018143}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MRY12-0050 {ECO:0000313|EMBL:GAD17877.1,
RC ECO:0000313|Proteomes:UP000018143};
RA Rimbara E., Matsui M., Mori S., Suzuki S., Suzuki M., Kim H., Sekizuka T.,
RA Kuroda M., Shibayama K.;
RT "Draft Genome Sequence of Helicobacter fennelliae Strain MRY12-0050,
RT Isolated from a Bacteremia Patient.";
RL Genome Announc. 1:e00512-13(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD17877.1}.
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DR EMBL; BASD01000001; GAD17877.1; -; Genomic_DNA.
DR RefSeq; WP_023946013.1; NZ_BASD01000001.1.
DR AlphaFoldDB; T1DUR4; -.
DR STRING; 1325130.HFN_0692; -.
DR eggNOG; COG3523; Bacteria.
DR OrthoDB; 9758229at2; -.
DR Proteomes; UP000018143; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR009612; IcmF-rel.
DR InterPro; IPR010623; IcmF_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR017731; TssM1-like.
DR InterPro; IPR048677; TssM1_hel.
DR InterPro; IPR025743; TssM1_N.
DR NCBIfam; TIGR03348; VI_IcmF; 1.
DR PANTHER; PTHR36153; INNER MEMBRANE PROTEIN-RELATED; 1.
DR PANTHER; PTHR36153:SF1; TYPE VI SECRETION SYSTEM COMPONENT TSSM1; 1.
DR Pfam; PF06761; IcmF-related; 1.
DR Pfam; PF14331; IcmF-related_N; 1.
DR Pfam; PF06744; IcmF_C; 1.
DR Pfam; PF21070; IcmF_helical; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018143};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..33
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 53..76
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 453..474
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 214..448
FT /note="Type VI secretion system component TssM1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14331"
FT DOMAIN 547..806
FT /note="IcmF-related"
FT /evidence="ECO:0000259|Pfam:PF06761"
FT DOMAIN 949..1047
FT /note="Type VI secretion system component TssM1 helical"
FT /evidence="ECO:0000259|Pfam:PF21070"
FT DOMAIN 1054..1135
FT /note="Type VI secretion system IcmF C-terminal"
FT /evidence="ECO:0000259|Pfam:PF06744"
SQ SEQUENCE 1185 AA; 138678 MW; A4CBF4D395B936A7 CRC64;
MFRKIFNFIK SKLFVVILLL IFFIVLSILF WFWGSSISFN DIYIFGNPYL RFGIIFILWL
IVFLFFFLKP TINFFISLKS EKRAKLKALK KESNDFVFRA KRNFFISLQD AKTTWKKKIK
FKKLPLVIII GEEGAGKSTF INYSNIEYPL SDSLQSHKKF HQSTNNFSLY VSKNGALLDT
EGNYFSQEKF FVPSSSDELP EDDLDKNKEF LIKKNIWRNF LNFLNRNFFH SKLNGIVLVI
DTRLFLSNPK EYSKDIIRYL VKRVNDCENY LNLKFPIYVV FSKIDLLEGM KEFFEIFNER
IVDRALGISF KEKLNDDILD KGLKQLSQSL FLNFTNKNHF IHSLEDKNKT YLFLKQFDNL
FALAKNFLLE IQNENAFKNN SSLRGVYFVS AYQENIPRNF LLDSVCEKYN VKKALAKVNP
LHNKQSYFVK SLLDDIIFKD YSLSSMKNIF KKFSLLLLVL VISLSTYFLS FYFISKDRTE
KEKAESTLTA LQILLSDTDY KKLSIKERAN LLVNLKNILG VYPQLSTNNN FMQYPSLNIS
YRGFLEAQEF YYKLNEDVLK NTLLKEMEYI LQADKDDKNN LIKTLYMYKS LFEQEYLNKN
LLKIWINENW QLLSKYNISR ENFLSGVDDI QKIHIESSNK DKKSIELAIR ALQRTTTRPQ
RLYVLLNFLN SDKRKEIYRI KEELGFAVNN IFAESSKITS IDKIYTKNGM IGFLQNLNQN
IDNMINIELW MLESIGDGLT KENKSMLSMG ILKLYLVEYQ NKWEDLLLSL APKQYSSKES
TLNQLNILSK EDNPVSALIK IVSTNTKLND VFLLKEAYNI GLNANEIKTH FSNITHFFSP
YHKIAEQDSI LSSGASAVGL NINNDVKIME VLGLDIKNIQ TKIIEFNTNK TQSIENKIAY
ALNREKEQDD PFVVFANDIK KLPPELEKYY AKLYLYAWNL VESHGVSLLN TAWFNEVYTP
FINDIAPFYP FNDESTQQLS IDSFKEFFGR NGTINRFYDK YLSSVLVKKT NTYSLNTQFD
VKINFSKSFL DFMRESKNLS NLMLTSNDNI KVNFTLQSLD LSADFSFIEL QYNSHNVKYD
HTLHSTLQII GEQFNGNTNL NLTAFDYHNS NLNYHKTYSG EWAWHRFLKE NYKNGAYSVI
FNNNEKLYFD FKLINGGSEA HQILNTLQQI KIVAYITMGG NDNGR
//