ID T1IQH2_STRMM Unreviewed; 1105 AA.
AC T1IQH2;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=Transcription elongation factor SPT5 {ECO:0000256|ARBA:ARBA00020181, ECO:0000256|PIRNR:PIRNR036945};
OS Strigamia maritima (European centipede) (Geophilus maritimus).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda;
OC Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.
OX NCBI_TaxID=126957 {ECO:0000313|EnsemblMetazoa:SMAR003290-PA, ECO:0000313|Proteomes:UP000014500};
RN [1] {ECO:0000313|Proteomes:UP000014500}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Brora {ECO:0000313|Proteomes:UP000014500};
RA Richards S.R., Qu J., Jiang H., Jhangiani S.N., Agravi P., Goodspeed R.,
RA Gross S., Mandapat C., Jackson L., Mathew T., Pu L., Thornton R., Saada N.,
RA Wilczek-Boney K.B., Lee S., Kovar C., Wu Y., Scherer S.E., Worley K.C.,
RA Muzny D.M., Gibbs R.;
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblMetazoa:SMAR003290-PA}
RP IDENTIFICATION.
RG EnsemblMetazoa;
RL Submitted (FEB-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PIRNR:PIRNR036945}.
CC -!- SIMILARITY: Belongs to the SPT5 family. {ECO:0000256|ARBA:ARBA00006956,
CC ECO:0000256|PIRNR:PIRNR036945}.
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DR EMBL; AFFK01018323; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; T1IQH2; -.
DR STRING; 126957.T1IQH2; -.
DR EnsemblMetazoa; SMAR003290-RA; SMAR003290-PA; SMAR003290.
DR eggNOG; KOG1999; Eukaryota.
DR HOGENOM; CLU_003537_0_0_1; -.
DR OMA; VGYMNTP; -.
DR OrthoDB; 24955at2759; -.
DR PhylomeDB; T1IQH2; -.
DR Proteomes; UP000014500; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0032784; P:regulation of DNA-templated transcription elongation; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR GO; GO:0140673; P:transcription elongation-coupled chromatin remodeling; IEA:InterPro.
DR CDD; cd06081; KOW_Spt5_1; 1.
DR CDD; cd06082; KOW_Spt5_2; 1.
DR CDD; cd06083; KOW_Spt5_3; 1.
DR CDD; cd06084; KOW_Spt5_4; 1.
DR CDD; cd06085; KOW_Spt5_5; 1.
DR CDD; cd06086; KOW_Spt5_6; 1.
DR CDD; cd09888; NGN_Euk; 1.
DR Gene3D; 2.30.30.30; -; 3.
DR Gene3D; 3.30.70.940; NusG, N-terminal domain; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041973; KOW_Spt5_1.
DR InterPro; IPR041975; KOW_Spt5_2.
DR InterPro; IPR041976; KOW_Spt5_3.
DR InterPro; IPR041977; KOW_Spt5_4.
DR InterPro; IPR041978; KOW_Spt5_5.
DR InterPro; IPR041980; KOW_Spt5_6.
DR InterPro; IPR005100; NGN-domain.
DR InterPro; IPR006645; NGN-like_dom.
DR InterPro; IPR036735; NGN_dom_sf.
DR InterPro; IPR039385; NGN_Euk.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR039659; SPT5.
DR InterPro; IPR024945; Spt5_C_dom.
DR InterPro; IPR022581; Spt5_N.
DR InterPro; IPR017071; TF_Spt5_eukaryote.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR11125; SUPPRESSOR OF TY 5; 1.
DR PANTHER; PTHR11125:SF7; TRANSCRIPTION ELONGATION FACTOR SPT5; 1.
DR Pfam; PF00467; KOW; 2.
DR Pfam; PF03439; Spt5-NGN; 1.
DR Pfam; PF11942; Spt5_N; 1.
DR PIRSF; PIRSF036945; Spt5; 1.
DR SMART; SM01104; CTD; 1.
DR SMART; SM00739; KOW; 6.
DR SMART; SM00738; NGN; 1.
DR SUPFAM; SSF50104; Translation proteins SH3-like domain; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PIRNR:PIRNR036945};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000014500};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|PIRNR:PIRNR036945}.
FT DOMAIN 190..281
FT /note="NusG-like N-terminal"
FT /evidence="ECO:0000259|SMART:SM00738"
FT DOMAIN 286..313
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 435..462
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 487..514
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 609..636
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 727..754
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT DOMAIN 795..923
FT /note="Spt5 C-terminal"
FT /evidence="ECO:0000259|SMART:SM01104"
FT DOMAIN 1035..1062
FT /note="KOW"
FT /evidence="ECO:0000259|SMART:SM00739"
FT REGION 1..110
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 684..725
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 775..923
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..36
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..77
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 78..97
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 779..821
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 834..856
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 871..889
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 890..923
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1105 AA; 121995 MW; A7BD03B761DAEB8E CRC64;
MSSNLSDSDA DSERSFQDSE GEGGEDTTSY AGRDDEAEEV PDNEVDDPGD EEPEGEDLAS
HSEEEEEDED EYDEEEDEDN RPRKRRKPRH GGFIIDEAEV DDEVEDEEDW EDGAEDIIDR
QAPNEGVTAR EIDNHRRLQM MFNSQKEDEI EDYYRKKYAE TSSSERRFGE GDAELSDEIS
QQMLLPGVKD PNLWMVKCRI GEEKATVTLL MRKMIAYQTT DEPLQIKSAI AVEGVKGYIY
VEAFKQTHVK QAIHGVSSLR PGQWSQQMVP IKEMVDVLRV VKEQMVLKPK AWVRLKRGLY
KDDVAQVDFV DTAQNQVHLK LMPRIDYTRM RGALRNSTNE QENKKKRKKR PAAKLFDIDA
IRKIGGEVTT DGDFLIFEGN RYSRKGFLYK NFAMSAIIGE GVKPTLSELE KFEDHIEGID
LKLPESRGKE DQGHNFSTGD NVEVCDGELI HLQGKIISID GNKITMLPKH EDLKEPLEFQ
AHELRKFFKI GDHVKVISGG YEGDTGLIVR ADDINVILFS DLTMHELKVL PRDLQICHDM
ATGVDSLGQF QWGDLIQLDP QTVGVIVQLE RENFQVLNMH GKLVRVKHQA VSKKRDARNA
VALDSGQNSI QVRDIVKVID GPHTGRQGEI KHLYRSFAFL HSRMMLENGG VFVCKTRHLL
LAGGSRPTSG PLMGSFTPMS PRISSPMHPG TGGGRGGGAG AGGGGGGGRG GGGGFGGPGR
GRSRRDQDLI GQTIKITQGH YKGHIGIVKD ATESTARVEL HSKCQTISVD RSRISVVGGP
TKGNLSSYSR TPIYGSQTPS YGVTGSRTPM YGSQTPMHDG SRTPHYGSHT PVHDGSRTPG
QSGAWDPSNA NTPARSNDYD DYHYDDPSPS PGYNPATPGY QPETPQGPYT PQPSISAMYS
SDHSYSPYQA TPSPTAYQSS PSPACYVATP SPAGYQPTPS PATYGTPSPI SYSPITPGAP
SPYNPQTPGA GMEHLSMQEW QTTDIEVKIK DSHDDAGLAG QTGIIRGVSG GMCSVFLVKE
DRVVSILSDH LEPVIPQQGN KVKVIFGDDR EITGKLLSID HQEGVVESDQ GGEIKMLQLR
FLCKMGEKNK FLFFYTVCND NMDIL
//