ID T2KH52_FORAG Unreviewed; 345 AA.
AC T2KH52;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDF77731.1};
GN ORFNames=BN863_190 {ECO:0000313|EMBL:CDF77731.1};
OS Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 /
OS M-2Alg 35-1).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Formosa.
OX NCBI_TaxID=1347342 {ECO:0000313|EMBL:CDF77731.1, ECO:0000313|Proteomes:UP000016160};
RN [1] {ECO:0000313|EMBL:CDF77731.1, ECO:0000313|Proteomes:UP000016160}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901
RC {ECO:0000313|Proteomes:UP000016160};
RX PubMed=23995932; DOI=10.1128/AEM.01937-13;
RA Mann A.J., Hahnke R.L., Huang S., Werner J., Xing P., Barbeyron T.,
RA Huettel B., Stueber K., Reinhardt R., Harder J., Gloeckner F.O.,
RA Amann R.I., Teeling H.;
RT "The genome of the alga-associated marine flavobacterium Formosa agariphila
RT KMM 3901T reveals a broad potential for degradation of algal
RT polysaccharides.";
RL Appl. Environ. Microbiol. 79:6813-6822(2013).
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DR EMBL; HG315671; CDF77731.1; -; Genomic_DNA.
DR RefSeq; WP_038525937.1; NZ_HG315671.1.
DR AlphaFoldDB; T2KH52; -.
DR STRING; 1347342.BN863_190; -.
DR PATRIC; fig|1347342.6.peg.20; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_0_10; -.
DR OrthoDB; 9768806at2; -.
DR Proteomes; UP000016160; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016160};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 345 AA; 38688 MW; 7B05DDA1848EAEB6 CRC64;
MKQRITLKQI ANTFNVSIAT VSKALKDSHE ISNATKLKIQ EYAYTHNYRP NSIALSLLNK
KTKTIGVIMP SILNPFFVKT FSGIEQVAND KGYNVIAIVS HSKLEKEIAS IHMLENGLVD
GLLISLSEET EAKQQFNHLK SFIDNAGPIV MFDRVSDSIN TDKVIVDDFN CAYKATEHLI
KTGCKHIAVV STLDNVGIIK LRINGYLKAL EDYKLPVNKK IINLIKPRYD FETEIKTMLD
YQDVDAIIGL EEFSAVESMV IAQDRGYNIP DDISIISFTS SDFFKYTKPS ITCINQHSVF
MGKTAAEILI SKIEQPLGTE DVFETKTIKT TLVERKSTKS LANSY
//
