ID T2KID1_FORAG Unreviewed; 255 AA.
AC T2KID1;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Helix-turn-helix family protein {ECO:0000313|EMBL:CDF78560.1};
GN ORFNames=BN863_8480 {ECO:0000313|EMBL:CDF78560.1};
OS Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 /
OS M-2Alg 35-1).
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Formosa.
OX NCBI_TaxID=1347342 {ECO:0000313|EMBL:CDF78560.1, ECO:0000313|Proteomes:UP000016160};
RN [1] {ECO:0000313|EMBL:CDF78560.1, ECO:0000313|Proteomes:UP000016160}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901
RC {ECO:0000313|Proteomes:UP000016160};
RX PubMed=23995932; DOI=10.1128/AEM.01937-13;
RA Mann A.J., Hahnke R.L., Huang S., Werner J., Xing P., Barbeyron T.,
RA Huettel B., Stueber K., Reinhardt R., Harder J., Gloeckner F.O.,
RA Amann R.I., Teeling H.;
RT "The genome of the alga-associated marine flavobacterium Formosa agariphila
RT KMM 3901T reveals a broad potential for degradation of algal
RT polysaccharides.";
RL Appl. Environ. Microbiol. 79:6813-6822(2013).
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DR EMBL; HG315671; CDF78560.1; -; Genomic_DNA.
DR RefSeq; WP_038527887.1; NZ_HG315671.1.
DR AlphaFoldDB; T2KID1; -.
DR STRING; 1347342.BN863_8480; -.
DR PATRIC; fig|1347342.6.peg.855; -.
DR eggNOG; COG1974; Bacteria.
DR HOGENOM; CLU_074799_0_0_10; -.
DR OrthoDB; 3831186at2; -.
DR Proteomes; UP000016160; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR CDD; cd06529; S24_LexA-like; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 2.10.109.10; Umud Fragment, subunit A; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR039418; LexA-like.
DR InterPro; IPR036286; LexA/Signal_pep-like_sf.
DR InterPro; IPR015927; Peptidase_S24_S26A/B/C.
DR PANTHER; PTHR40661; -; 1.
DR PANTHER; PTHR40661:SF3; FELS-1 PROPHAGE TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF00717; Peptidase_S24; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51306; LexA/Signal peptidase; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000016160}.
FT DOMAIN 6..60
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 255 AA; 29259 MW; FB94265A6A419F99 CRC64;
MIGSNIRHLR TLKKLSQEAL AKDLAITRSR IGSYEEGRSE PAIDMLIKFS DYFKLPVDTF
LKTDLTKTKD GAFLKVGENR ILFPMLVDIN DDELIEVIPV KASAGYLNGY DDPEYINQLQ
KIKLPFLPTG KHRAFPIKGD SMLPLKSGSF VVGRFTEDIR DVKDGRTYVV LTSSQGMVYK
RVYNQIEEHN GLLLVSDNKT YNPYIVPIHD VLELWEFTCC INTQEYEEHE LQLSSIIRMF
NELGIELKAL EKMMQ
//
