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Database: UniProt
Entry: U1JFD8_9GAMM
LinkDB: U1JFD8_9GAMM
Original site: U1JFD8_9GAMM 
ID   U1JFD8_9GAMM            Unreviewed;      1028 AA.
AC   U1JFD8;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   SubName: Full=Leucine-rich protein {ECO:0000313|EMBL:ERG20116.1};
DE   Flags: Fragment;
GN   ORFNames=PCIT_03428 {ECO:0000313|EMBL:ERG20116.1};
OS   Pseudoalteromonas citrea DSM 8771.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Pseudoalteromonadaceae; Pseudoalteromonas.
OX   NCBI_TaxID=1117314 {ECO:0000313|EMBL:ERG20116.1, ECO:0000313|Proteomes:UP000016487};
RN   [1] {ECO:0000313|EMBL:ERG20116.1, ECO:0000313|Proteomes:UP000016487}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 8771 {ECO:0000313|Proteomes:UP000016487};
RX   PubMed=22535931; DOI=10.1128/JB.00265-12;
RA   Xie B.B., Shu Y.L., Qin Q.L., Rong J.C., Zhang X.Y., Chen X.L., Shi M.,
RA   He H.L., Zhou B.C., Zhang Y.Z.;
RT   "Genome sequences of type strains of seven species of the marine bacterium
RT   Pseudoalteromonas.";
RL   J. Bacteriol. 194:2746-2747(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ERG20116.1}.
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DR   EMBL; AHBZ02000041; ERG20116.1; -; Genomic_DNA.
DR   AlphaFoldDB; U1JFD8; -.
DR   STRING; 1117314.PCIT_03428; -.
DR   eggNOG; COG1100; Bacteria.
DR   eggNOG; COG4886; Bacteria.
DR   OrthoDB; 6309115at2; -.
DR   Proteomes; UP000016487; Unassembled WGS sequence.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 1.
DR   Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000157; TIR_dom.
DR   InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR   PANTHER; PTHR46652; LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED; 1.
DR   PANTHER; PTHR46652:SF12; LEUCINE-RICH REPEAT PROTEIN (LRRP); 1.
DR   Pfam; PF08477; Roc; 1.
DR   Pfam; PF13676; TIR_2; 1.
DR   SMART; SM00255; TIR; 1.
DR   SUPFAM; SSF52058; L domain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR   PROSITE; PS51450; LRR; 1.
DR   PROSITE; PS50104; TIR; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000016487}.
FT   DOMAIN          843..1024
FT                   /note="TIR"
FT                   /evidence="ECO:0000259|PROSITE:PS50104"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ERG20116.1"
SQ   SEQUENCE   1028 AA;  116596 MW;  DAAABB12685AB632 CRC64;
     LSSLANLDAL AGLTELTRLV LRGFSSLTNL NALAGLIQLT RLYLSDCQSL TNLNALAGLT
     QLTELDLSDC ESVTSLAGIT GLTQLTELNL MNCARIRDIE LVVTLTNLTW LRLDGVALDN
     IGFVPALHKL EYIDLDNNSI TDITPLYALP QLNTVLLQYN ALVDVAQLHT LLECPTLEEL
     QLYSNPFASH YGIKLEEHED SRSVLRNLLF RIDDSHGKHI VLPSKVLLLG NHAAGKSSLA
     HYLTQGTLAH NGDSTHILQI KPYKKQADVR ARKAAHKASA LPDALIYDFG GQDYYHGIYR
     VFMSQHALTC LLWHPQSDCN KVEKDSEKVM SRHFNRDYWL GYWQHYNALS SERTISTAQL
     TSPIDAPPFS APLTDDTKKE ANAEPAAPLL LIQTHADEEA NLRPCDNPYV LNQHIVSLDS
     TQENPLFSAS LQYFQAQLDS LISQTQKTVA AALWYEKFLK MIFSEHKKSV KRHWQAKPVR
     ELVALYNPSV NNVAQQLTHL KTELSQLHAQ GMVLYYPSVN AEKVWLHPMS FAYYVHTKVL
     SKATLGEYKG VIPAQALRNI DQDIISVLEK EQVIFKHDYG DQAGEYIVPN YLPLTDDTQH
     DYHLLTFGVQ RDFAFGLWFK AYLPLGLINQ LICHFGNLPN YKKFWRDQLL FTLGVTEQGG
     QSQASQVLIK LIFTEQLQIK VFINNSDEYI RTAHSRYVYY VIMSLYNDGQ PLQQVGEFEQ
     YFAALSHGSA EKSATKYEDT LAAMKDKKPT EKALPHSFEK NDDTVAHAAE HLKALERIYV
     TPPQGLWVSV DERHYINALD LSKINRETRL PCELITPVRA PSNQKQWLSL APFKPFTHRR
     PSAMLKVFVS YSHDDIAPRR ELQQYLINLE RDGIIELWQD GMINTGDDWH DTIVTALDDA
     DVIIMLVSQS FIASSYVHSV EMPLALKNMA RSQAKIFPIL LSNCDYQDWQ IMPADVRTQL
     KDKQGMGNKK EAEGTQKTAA TPVVMGKYQF FPQDEEAQRL KPLNRWQYPE DAWTQVTQQL
     RTLSTNTK
//
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