ID U1YH02_9BURK Unreviewed; 158 AA.
AC U1YH02;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:ERI34730.1};
GN ORFNames=N879_04110 {ECO:0000313|EMBL:ERI34730.1};
OS Alcaligenes sp. EGD-AK7.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Alcaligenaceae; Alcaligenes.
OX NCBI_TaxID=1386079 {ECO:0000313|EMBL:ERI34730.1, ECO:0000313|Proteomes:UP000016497};
RN [1] {ECO:0000313|EMBL:ERI34730.1, ECO:0000313|Proteomes:UP000016497}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EGD-AK7 {ECO:0000313|EMBL:ERI34730.1};
RX PubMed=24407646;
RA Sagarkar S., Bhardwaj P., Yadav T.C., Qureshi A., Khardenavis A.,
RA Purohit H.J., Kapley A.;
RT "Draft genome sequence of atrazine-utilizing bacteria isolated from Indian
RT agricultural soil.";
RL Genome Announc. 2:e01149-13(2014).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERI34730.1}.
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DR EMBL; AVOG02000001; ERI34730.1; -; Genomic_DNA.
DR RefSeq; WP_021446710.1; NZ_AVOG02000001.1.
DR AlphaFoldDB; U1YH02; -.
DR GeneID; 29370680; -.
DR PATRIC; fig|1386079.3.peg.795; -.
DR OrthoDB; 9808360at2; -.
DR Proteomes; UP000016497; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR010242; TF_HTH_IscR.
DR InterPro; IPR000944; Tscrpt_reg_Rrf2.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR02010; IscR; 1.
DR NCBIfam; TIGR00738; rrf2_super; 1.
DR PANTHER; PTHR33221:SF5; HTH-TYPE TRANSCRIPTIONAL REGULATOR ISCR; 1.
DR PANTHER; PTHR33221; WINGED HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, RRF2 FAMILY; 1.
DR Pfam; PF02082; Rrf2; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51197; HTH_RRF2_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:ERI34730.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000016497}.
SQ SEQUENCE 158 AA; 17300 MW; 9EB6DF1E8BABCC16 CRC64;
MRLTTKGRFA VTAMIDLALR QQSGPVTLAG ISQRQGISLS YLEQLFGKLR RHELVDSVRG
PGGGYTLARL ARHITVADIV FAVDEPVDAT QCGGKGNCKQ GTNGQKGECM THELWATLSR
KMVDYLDSVS LQDLVDQQRL RQLKLAAQEA GQPEECTL
//