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Database: UniProt
Entry: U2HZC1_9SPHI
LinkDB: U2HZC1_9SPHI
Original site: U2HZC1_9SPHI 
ID   U2HZC1_9SPHI            Unreviewed;       476 AA.
AC   U2HZC1;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   SubName: Full=tRNA nucleotidyltransferase {ECO:0000313|EMBL:ERJ60600.1};
GN   ORFNames=M472_17735 {ECO:0000313|EMBL:ERJ60600.1};
OS   Sphingobacterium paucimobilis HER1398.
OC   Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC   Sphingobacteriaceae; Sphingobacterium.
OX   NCBI_TaxID=1346330 {ECO:0000313|EMBL:ERJ60600.1, ECO:0000313|Proteomes:UP000016584};
RN   [1] {ECO:0000313|EMBL:ERJ60600.1, ECO:0000313|Proteomes:UP000016584}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HER1398 {ECO:0000313|EMBL:ERJ60600.1,
RC   ECO:0000313|Proteomes:UP000016584};
RX   PubMed=23929486;
RA   White R.A.III., Suttle C.A.;
RT   "The Draft Genome Sequence of Sphingomonas paucimobilis Strain HER1398
RT   (Proteobacteria), Host to the Giant PAU Phage, Indicates That It Is a
RT   Member of the Genus Sphingobacterium (Bacteroidetes).";
RL   Genome Announc. 1:e00598-13(2013).
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
CC   -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC       polymerase family. {ECO:0000256|RuleBase:RU003953}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ERJ60600.1}.
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DR   EMBL; ATDL01000004; ERJ60600.1; -; Genomic_DNA.
DR   RefSeq; WP_021068698.1; NZ_ATDL01000004.1.
DR   AlphaFoldDB; U2HZC1; -.
DR   STRING; 1346330.M472_17735; -.
DR   PATRIC; fig|1346330.5.peg.503; -.
DR   eggNOG; COG0617; Bacteria.
DR   OrthoDB; 9805698at2; -.
DR   Proteomes; UP000016584; Unassembled WGS sequence.
DR   GO; GO:0016779; F:nucleotidyltransferase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0031123; P:RNA 3'-end processing; IEA:UniProt.
DR   CDD; cd00077; HDc; 1.
DR   CDD; cd05398; NT_ClassII-CCAase; 1.
DR   Gene3D; 1.10.246.80; -; 1.
DR   Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR   Gene3D; 1.10.3090.10; cca-adding enzyme, domain 2; 1.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR006675; HDIG_dom.
DR   InterPro; IPR043519; NT_sf.
DR   InterPro; IPR002646; PolA_pol_head_dom.
DR   InterPro; IPR032828; PolyA_RNA-bd.
DR   NCBIfam; TIGR00277; HDIG; 1.
DR   PANTHER; PTHR47545; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR   PANTHER; PTHR47545:SF1; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR   Pfam; PF01966; HD; 1.
DR   Pfam; PF01743; PolyA_pol; 1.
DR   Pfam; PF12627; PolyA_pol_RNAbd; 1.
DR   SMART; SM00471; HDc; 1.
DR   SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR   SUPFAM; SSF81891; Poly A polymerase C-terminal region-like; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Reference proteome {ECO:0000313|Proteomes:UP000016584};
KW   RNA repair {ECO:0000256|ARBA:ARBA00022800};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU003953};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003953};
KW   tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT   DOMAIN          254..365
FT                   /note="HD"
FT                   /evidence="ECO:0000259|PROSITE:PS51831"
SQ   SEQUENCE   476 AA;  54574 MW;  D0BD54F5F4D4F2CF CRC64;
     MIEQLQHPIF SIIRDLADKT DTVCYVIGGY VRDRLMDRPF KYDVDILVIG SGIEFATLLG
     EQLQTKVALY KSFGTAMLVY DGLDIEFVGA RKESYRRDSR KPIVEDGTLE DDQNRRDFTI
     NAMAYSLNGA TFGQLLDPFH GVADIQERII RTPLDPNDTF SDDPLRMMRA IRFATQLNFR
     IDIKAIQAIV DNKERIKIIS KERITDELNK IILSPKPSVG FRYLFDTGLL ELIFPAMQQL
     YGVEVIEGRG HKDNFYHTLE VLDNVAELSD DLWLRWAAIM HDIAKPATKR FDKKAGWTFH
     GHEDKGARMV PKLFAELKLP LNEKMKFVQK LVQLHLRPIV LAQDIVTDSA VRRLLFEAGD
     DIDALMLLCH ADVTTKNEFK KKKYRDNFEL VKQKLKDVEE RDHLRNWQPP VTGEDIMHVF
     GLGPGKQVGI IKNAIREAIL EGDIPNEREA AYQFMVARAK KLNLEPKETL SLATSK
//
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