ID U2J429_9SPHI Unreviewed; 424 AA.
AC U2J429;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=Reverse transcriptase domain-containing protein {ECO:0000259|PROSITE:PS50878};
GN ORFNames=M472_01350 {ECO:0000313|EMBL:ERJ57403.1};
OS Sphingobacterium paucimobilis HER1398.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Sphingobacterium.
OX NCBI_TaxID=1346330 {ECO:0000313|EMBL:ERJ57403.1, ECO:0000313|Proteomes:UP000016584};
RN [1] {ECO:0000313|EMBL:ERJ57403.1, ECO:0000313|Proteomes:UP000016584}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HER1398 {ECO:0000313|EMBL:ERJ57403.1,
RC ECO:0000313|Proteomes:UP000016584};
RX PubMed=23929486;
RA White R.A.III., Suttle C.A.;
RT "The Draft Genome Sequence of Sphingomonas paucimobilis Strain HER1398
RT (Proteobacteria), Host to the Giant PAU Phage, Indicates That It Is a
RT Member of the Genus Sphingobacterium (Bacteroidetes).";
RL Genome Announc. 1:e00598-13(2013).
CC -!- SIMILARITY: Belongs to the bacterial reverse transcriptase family.
CC {ECO:0000256|ARBA:ARBA00034120}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERJ57403.1}.
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DR EMBL; ATDL01000022; ERJ57403.1; -; Genomic_DNA.
DR AlphaFoldDB; U2J429; -.
DR STRING; 1346330.M472_01350; -.
DR PATRIC; fig|1346330.5.peg.4135; -.
DR eggNOG; COG3344; Bacteria.
DR Proteomes; UP000016584; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-KW.
DR CDD; cd01651; RT_G2_intron; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR030931; Group_II_RT_mat.
DR InterPro; IPR013597; Mat_intron_G2.
DR InterPro; IPR000123; Reverse_transcriptase_msDNA.
DR InterPro; IPR000477; RT_dom.
DR NCBIfam; TIGR04416; group_II_RT_mat; 1.
DR PANTHER; PTHR34047:SF2; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL; 1.
DR PANTHER; PTHR34047; NUCLEAR INTRON MATURASE 1, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF08388; GIIM; 1.
DR Pfam; PF00078; RVT_1; 1.
DR PRINTS; PR00866; RNADNAPOLMS.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 3: Inferred from homology;
KW Antiviral defense {ECO:0000256|ARBA:ARBA00023118};
KW Reference proteome {ECO:0000313|Proteomes:UP000016584}.
FT DOMAIN 44..272
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
SQ SEQUENCE 424 AA; 49470 MW; 4D63550D35AABDF1 CRC64;
MLEEILHIRN VEHAVNRVIS NGGSSGVDGM QIDELRDYLN THWEILRSDI LSGTYRPQAV
RKVEIPKASG GKRMLGIPTV IDRVIQQSIS QWLGLKYEGY FHGNSYGFRP NRNAHQAVIK
GQEYLNSGYI WIVELDLEQF FDQVNHDKLM HLLSKKIKDR RTLQLIGRYL RCGIMENGLE
QKRHQGTPQG SPLSPLLSNI ILDELDMELS SRGHLFVRYA DDCSIYTKSS KSAHRIMMNI
TGYIEDKLKL KVNREKSKVS SPTQSSLLGF SFFKAQGRWQ IRISPKSIGR IREKVRQNTR
RNSATPMRER LGNLRQISRG WVNYFRVARG KTVMMALDRL VRRRLRVLLW KQWKTIDNRI
RNLVKLGTKH WLAYQHANTR KSYTRTGTSV ILETTLTNSY FTRLGYEGFA DYYYWKTTHQ
TKLF
//
