ID   U2N9I5_9CLOT            Unreviewed;       722 AA.
AC   U2N9I5;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:ERK32167.1};
GN   ORFNames=CINTURNW_0452 {ECO:0000313|EMBL:ERK32167.1};
OS   Clostridium intestinale URNW.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=1294142 {ECO:0000313|EMBL:ERK32167.1, ECO:0000313|Proteomes:UP000016721};
RN   [1] {ECO:0000313|EMBL:ERK32167.1, ECO:0000313|Proteomes:UP000016721}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=URNW {ECO:0000313|EMBL:ERK32167.1,
RC   ECO:0000313|Proteomes:UP000016721};
RX   PubMed=24136853;
RA   Lal S., Ramachandran U., Zhang X., Sparling R., Levin D.B.;
RT   "Draft Genome Sequence of the Hydrogen- and Ethanol-Producing Bacterium
RT   Clostridium intestinale Strain URNW.";
RL   Genome Announc. 1:e00871-13(2013).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ERK32167.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; APJA01000006; ERK32167.1; -; Genomic_DNA.
DR   RefSeq; WP_021800510.1; NZ_KI273145.1.
DR   AlphaFoldDB; U2N9I5; -.
DR   STRING; 1294142.CINTURNW_0452; -.
DR   PATRIC; fig|1294142.3.peg.431; -.
DR   eggNOG; COG2183; Bacteria.
DR   HOGENOM; CLU_009833_0_2_9; -.
DR   OrthoDB; 9804714at2; -.
DR   Proteomes; UP000016721; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd05685; S1_Tex; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR   Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR   Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR   Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR   InterPro; IPR041692; HHH_9.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR010994; RuvA_2-like.
DR   InterPro; IPR003029; S1_domain.
DR   InterPro; IPR044146; S1_Tex.
DR   InterPro; IPR023323; Tex-like_dom_sf.
DR   InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR   InterPro; IPR018974; Tex-like_N.
DR   InterPro; IPR032639; Tex_YqgF.
DR   InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR   InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR   PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR   PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR   Pfam; PF12836; HHH_3; 1.
DR   Pfam; PF17674; HHH_9; 1.
DR   Pfam; PF00575; S1; 1.
DR   Pfam; PF09371; Tex_N; 1.
DR   Pfam; PF16921; Tex_YqgF; 1.
DR   SMART; SM00316; S1; 1.
DR   SMART; SM00732; YqgFc; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR   SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR   PROSITE; PS50126; S1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000016721}.
FT   DOMAIN          648..717
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   722 AA;  81104 MW;  C3F3F2A2C8649C7D CRC64;
     MNNINEVLSK ELNISLKQVE SVIELIDGGN TVPFIARYRK EVTGGLTDEV LRKFSERLTY
     LRNLNERKES VIRIIEETGN LTEEIKEKVL KAETQSEVED IYRPFKPKKR TRATIALEKG
     LKPLADLIFT GEFKGNLLDK AKEFIDEEKA VSNEEEALVG AMDIVAEQIS DNADYRKWLR
     EFLFKEGVLE TKGGSEDPTP YEMYYDYSEP VRFLPSHRIL AINRGEKEKI LNVKVVANEE
     KIITYLKNRI LKGNSETDKY LEEAIKDSLK RLIYPSIERE IRSELTEKGE EGAIRIFNEN
     LKSLLMQSPI KGKVVMGYDP GFRTGCKVAV LDDTGKFLEK ATVYPTVPKK DVKGTIKVLK
     ELINKYDVDV ISLGNGTASR ESEEVLAEMI TEIKKETGRD VYYCIVSEAG ASVYSASELA
     QKEYPDLDVT IRGAISIGRR LQDPLAELVK IDTKSIGVGQ YQHDVAVKKL DESLKGVVED
     CVNKVGVDLN VATPSLLSYI SGINTSIAAN IVAYREENGK FKNRKELLKV KRLGQKAYEQ
     CAGFLRVMES SEPLDNTAVH PESYVTANNL IKELGYSKGE LKKASLTDIE GRVQEIGIKE
     LAARLNVGEP TLKDIVGELK KPGRDPREEL PKPIFKSGVI DLKDLKPGME LMGTVRNVSD
     FGAFVDIGVH QDGLVHKSQM ANRRVNHPLD IVKLGDIIKV KILEVDEKRK RISLSMKDVS
     QE
//