ID U2NHL1_9CLOT Unreviewed; 258 AA.
AC U2NHL1;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:ERK28593.1};
GN ORFNames=CINTURNW_4235 {ECO:0000313|EMBL:ERK28593.1};
OS Clostridium intestinale URNW.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1294142 {ECO:0000313|EMBL:ERK28593.1, ECO:0000313|Proteomes:UP000016721};
RN [1] {ECO:0000313|EMBL:ERK28593.1, ECO:0000313|Proteomes:UP000016721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=URNW {ECO:0000313|EMBL:ERK28593.1,
RC ECO:0000313|Proteomes:UP000016721};
RX PubMed=24136853;
RA Lal S., Ramachandran U., Zhang X., Sparling R., Levin D.B.;
RT "Draft Genome Sequence of the Hydrogen- and Ethanol-Producing Bacterium
RT Clostridium intestinale Strain URNW.";
RL Genome Announc. 1:e00871-13(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERK28593.1}.
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DR EMBL; APJA01000034; ERK28593.1; -; Genomic_DNA.
DR RefSeq; WP_021804090.1; NZ_KI273145.1.
DR AlphaFoldDB; U2NHL1; -.
DR STRING; 1294142.CINTURNW_4235; -.
DR PATRIC; fig|1294142.3.peg.4372; -.
DR eggNOG; COG1737; Bacteria.
DR HOGENOM; CLU_055769_4_3_9; -.
DR Proteomes; UP000016721; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF19; HTH-TYPE TRANSCRIPTIONAL REGULATOR GLVR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000016721}.
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 114..255
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 258 AA; 29565 MW; 340B2E0287CF5649 CRC64;
MNFFNYIEKT RVNLNKNENE LLQYFIENAS SVKSMKIQDV SKKTFVSTAA IIRFCKKLGF
SGYSEFKNTL YHTVENQEDN NKLQSPKNIG SHFDIFDDIL KTKNLINDSV IDEIVDLIYE
SNRLEFYGEG SSRIVCEDMT RRFRLVEKQA SYYDDTSLMY LSASNLNSKD LAFCISMSGE
TSQIVKAANI AKTKKATVIS VTTMSNNTLS NIAHKPLFVC STRYSVGEMN FVSRIPATTV
LEYIFNKYLH KYSNSNTR
//
