ID U2YAM3_9SPHN Unreviewed; 334 AA.
AC U2YAM3;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAD50466.1};
GN ORFNames=NT2_09_00740 {ECO:0000313|EMBL:GAD50466.1};
OS Caenibius tardaugens NBRC 16725.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Erythrobacteraceae; Caenibius.
OX NCBI_TaxID=1219035 {ECO:0000313|EMBL:GAD50466.1, ECO:0000313|Proteomes:UP000016568};
RN [1] {ECO:0000313|EMBL:GAD50466.1, ECO:0000313|Proteomes:UP000016568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 16725 {ECO:0000313|EMBL:GAD50466.1,
RC ECO:0000313|Proteomes:UP000016568};
RA Isaki S., Hosoyama A., Tsuchikane K., Katsumata H., Ando Y., Yamazaki S.,
RA Fujita N.;
RT "Whole genome shotgun sequence of Novosphingobium tardaugens NBRC 16725.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD50466.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BASZ01000009; GAD50466.1; -; Genomic_DNA.
DR RefSeq; WP_021691284.1; NZ_CP034179.1.
DR AlphaFoldDB; U2YAM3; -.
DR KEGG; ntd:EGO55_05255; -.
DR eggNOG; COG2207; Bacteria.
DR OrthoDB; 7191628at2; -.
DR Proteomes; UP000016568; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR035418; AraC-bd_2.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR46796:SF12; HTH-TYPE DNA-BINDING TRANSCRIPTIONAL ACTIVATOR EUTR; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF14525; AraC_binding_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016568};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 224..325
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 334 AA; 37353 MW; 0C643A8E617D9A57 CRC64;
MIARESFEQL RLPLLKPSSL SSAARHLSGV HGDIYKFRPE DRLSQNLVIH GPQNPDLAIC
AVKTSSAFVS ETITHRGVNL MMPLDSDFSF LSERKQWEKA PPSNLLISSP GRPQCIRWPE
GGRLFALRIS QTAFDHVLSR SGERAWLPMQ FAPVMDLEST AGEAFEPLLR ALAVDVADDE
AHFQHGRVAR AWASVIASAL VRRHPNNVYR QDDNAGEEIP HFVKVALDYI ERHLQDEILD
RASVVAASGV PARTLHYWFK KLFCIGPMAY ARQLRLHHIR TELLAGSQRC VIADVAAQWG
FYDGSAFAAA YREMFGELPS TTVKRKAGGM ELLD
//
