ID U2YJU2_9SPHN Unreviewed; 477 AA.
AC U2YJU2;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Glutamate synthase small subunit {ECO:0000313|EMBL:GAD48735.1};
GN Name=gltD {ECO:0000313|EMBL:GAD48735.1};
GN ORFNames=NT2_04_01460 {ECO:0000313|EMBL:GAD48735.1};
OS Caenibius tardaugens NBRC 16725.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Erythrobacteraceae; Caenibius.
OX NCBI_TaxID=1219035 {ECO:0000313|EMBL:GAD48735.1, ECO:0000313|Proteomes:UP000016568};
RN [1] {ECO:0000313|EMBL:GAD48735.1, ECO:0000313|Proteomes:UP000016568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 16725 {ECO:0000313|EMBL:GAD48735.1,
RC ECO:0000313|Proteomes:UP000016568};
RA Isaki S., Hosoyama A., Tsuchikane K., Katsumata H., Ando Y., Yamazaki S.,
RA Fujita N.;
RT "Whole genome shotgun sequence of Novosphingobium tardaugens NBRC 16725.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Amino-acid biosynthesis. {ECO:0000256|ARBA:ARBA00029440}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD48735.1}.
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DR EMBL; BASZ01000004; GAD48735.1; -; Genomic_DNA.
DR RefSeq; WP_021689642.1; NZ_CP034179.1.
DR AlphaFoldDB; U2YJU2; -.
DR KEGG; ntd:EGO55_09555; -.
DR eggNOG; COG0493; Bacteria.
DR OrthoDB; 9803192at2; -.
DR Proteomes; UP000016568; Unassembled WGS sequence.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:InterPro.
DR GO; GO:0016639; F:oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor; IEA:InterPro.
DR GO; GO:0006537; P:glutamate biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 1.10.1060.10; Alpha-helical ferredoxin; 1.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR028261; DPD_II.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR006005; Glut_synth_ssu1.
DR InterPro; IPR009051; Helical_ferredxn.
DR NCBIfam; TIGR01317; GOGAT_sm_gam; 1.
DR PANTHER; PTHR43100; GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN; 1.
DR PANTHER; PTHR43100:SF1; GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN; 1.
DR Pfam; PF14691; Fer4_20; 1.
DR Pfam; PF07992; Pyr_redox_2; 1.
DR PRINTS; PR00419; ADXRDTASE.
DR SUPFAM; SSF46548; alpha-helical ferredoxin; 1.
DR SUPFAM; SSF51971; Nucleotide-binding domain; 2.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
PE 4: Predicted;
KW Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605};
KW Glutamate biosynthesis {ECO:0000256|ARBA:ARBA00023164};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000016568}.
FT DOMAIN 37..68
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 477 AA; 52367 MW; BAB9AD6317057D4D CRC64;
MGKETGFLEY ERKDRGYLDP KERVKNYKEF VVPLAEGDLR TQAARCMNCG IPYCHNGCPV
NNMIPDWNHL TYEGDWRDAL EVLHSTNNFP EFTGRICPAP CEASCTLNIV DTPVSIKSIE
CAIVDRGWKE GWIEPQVPAK RTGKSVAVVG SGPAGMACAQ QLARAGHSVT LFEKNDRIGG
LLRYGIPDFK MEKHLIERRK KQMEAEGVTV RTSTEIGVDV SFRSLKENFD AVVLSGGAED
PRGLQIPGAE LPGLHFAMDF LTQQNKRNAG DDERTAAPDG SLLATGKHVV VIGGGDTGSD
CVGTSNRQGA ASVTQLEIMP KPPVKENKAL TWPDWPLKLR TSSSHDEGVD RDWAVLTKRV
VGENEVTGLE CVRVEWNNGK MEEVPGSEFT LKADLIFLAM GFLGPRKPGM IDQSGVTLTD
RGNVDANVQD YKTSEDMVFA CGDMRRGQSL VVWAIREGRQ CARAVDEALM GVSELPR
//
