ID U2YNN2_9SPHN Unreviewed; 339 AA.
AC U2YNN2;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Putative AraC family transcriptional regulator {ECO:0000313|EMBL:GAD50187.1};
GN ORFNames=NT2_07_01870 {ECO:0000313|EMBL:GAD50187.1};
OS Caenibius tardaugens NBRC 16725.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Erythrobacteraceae; Caenibius.
OX NCBI_TaxID=1219035 {ECO:0000313|EMBL:GAD50187.1, ECO:0000313|Proteomes:UP000016568};
RN [1] {ECO:0000313|EMBL:GAD50187.1, ECO:0000313|Proteomes:UP000016568}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 16725 {ECO:0000313|EMBL:GAD50187.1,
RC ECO:0000313|Proteomes:UP000016568};
RA Isaki S., Hosoyama A., Tsuchikane K., Katsumata H., Ando Y., Yamazaki S.,
RA Fujita N.;
RT "Whole genome shotgun sequence of Novosphingobium tardaugens NBRC 16725.";
RL Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAD50187.1}.
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DR EMBL; BASZ01000007; GAD50187.1; -; Genomic_DNA.
DR AlphaFoldDB; U2YNN2; -.
DR eggNOG; COG2207; Bacteria.
DR Proteomes; UP000016568; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR035418; AraC-bd_2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR46796:SF12; HTH-TYPE DNA-BINDING TRANSCRIPTIONAL ACTIVATOR EUTR; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF14525; AraC_binding_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016568};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 237..337
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 339 AA; 37774 MW; D393BCAD84326EDE CRC64;
MLDRSMILAS AEEAMAGSHI MGSHRVFQSD DLDQTRDLIA RTYCPHRLSL QGRQGKLGAW
LNHKRLSQIG VGAMAYGADV HISEVEDQDF VLLMLPLQGV ASNGLGGGRS VETHSGRAVV
TSTTELDRMW WSADCAQLVV QVSSAALDRH LSMMTGRGLR EPLRFAPEME LMTGAVSWWK
YVAMLIEDLS SAEQSTAQAS LAHLESMLIV KLLETQNSNY YDQLRPQSSR IAPQHVRRVE
RFIVDNVGMA ITLEQLVDVS GVSARALFDG FRRFRGCSPM AYLRSVRLDR VRQDLLGARE
GETVTSIACK WGFYQFGRFA GQYRQAYGEL PSETLRAGR
//
