GenomeNet

Database: UniProt
Entry: U3CHM3_CALJA
LinkDB: U3CHM3_CALJA
Original site: U3CHM3_CALJA 
ID   U3CHM3_CALJA            Unreviewed;       625 AA.
AC   U3CHM3;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   27-MAR-2024, entry version 40.
DE   SubName: Full=PDZ and LIM domain protein 5 isoform f {ECO:0000313|EMBL:JAB18452.1};
GN   Name=PDLIM5 {ECO:0000313|EMBL:JAB18452.1};
OS   Callithrix jacchus (White-tufted-ear marmoset).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC   Callitrichinae; Callithrix; Callithrix.
OX   NCBI_TaxID=9483 {ECO:0000313|EMBL:JAB18452.1};
RN   [1] {ECO:0000313|EMBL:JAB18452.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Hippocampus {ECO:0000313|EMBL:JAB18452.1};
RX   PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA   Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA   Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT   "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT   sequences.";
RL   Gigascience 3:14-14(2014).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; GAMS01004684; JAB18452.1; -; mRNA.
DR   AlphaFoldDB; U3CHM3; -.
DR   Bgee; ENSCJAG00000006882; Expressed in heart and 6 other cell types or tissues.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   CDD; cd09453; LIM1_ENH; 1.
DR   CDD; cd09457; LIM2_ENH; 1.
DR   CDD; cd09459; LIM3_ENH; 1.
DR   CDD; cd00992; PDZ_signaling; 1.
DR   Gene3D; 2.30.42.10; -; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 3.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR24214:SF32; PDZ AND LIM DOMAIN PROTEIN 5; 1.
DR   PANTHER; PTHR24214; PDZ AND LIM DOMAIN PROTEIN ZASP; 1.
DR   Pfam; PF00412; LIM; 3.
DR   Pfam; PF00595; PDZ; 1.
DR   SMART; SM00132; LIM; 3.
DR   SMART; SM00228; PDZ; 1.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 3.
DR   SUPFAM; SSF50156; PDZ domain-like; 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 3.
DR   PROSITE; PS50106; PDZ; 1.
PE   2: Evidence at transcript level;
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00023038};
KW   Zinc {ECO:0000256|ARBA:ARBA00023038}.
SQ   SEQUENCE   625 AA;  67822 MW;  B1FC9DA7537D1575 CRC64;
     MSNYSVSLVG PAPWGFRLQG GKDFNMPLTI SSLKDGGKAA QANVRIGDVV LTIDGISAQG
     MTHLEAQNKI KGCTGSLNMT LQRASATPKP EPVPVQKPTV TSVCSETSQE LAEGQRRGSQ
     GDSKQQNGKI PPKRPPRKHI VERNTEFYHI PTHSDASKKR LIEDTEDWRP RTGTTQSRSF
     RILAQITGTE HLKESETDNT KKAKFDSSLE DLHKSGLHPP ATPQVLTIGS QVATLSKVAT
     TYSSLSCYTG NVEYSFEGFR NFSTFSSPAR YSAAVLSSAA ATVSAVIAAK TRLYTPERYH
     SILDALCISP VSKPLAFSYL QSSRKSTGSI HVKKTSNSQE PSPQLASSVA STRSMPESLD
     SPASGRPGVA SLATAAAFKP VGSTGIIKSP SWQRPNQAVP STGRISNSAT SSGAVAPANS
     ALGQPQPSDQ DTLVQRAEHI PAGKRTPMCA HCNQVIRGPF LVALGKSWHP EEFNCAHCKN
     TMAYIGFVEE KGALYCELCY EKFFAPECGR CQRKILGEVI NALKQTWHVS CFVCVACGKP
     IRNNVFHLED GEPYCETDYY ALFGTICHGC EFPIEAGDMF LEALGYTWHD TCFVCSVCCE
     SLEGQTFFSK KDKPLCKKHA HSVNF
//
DBGET integrated database retrieval system