ID U3CHM3_CALJA Unreviewed; 625 AA.
AC U3CHM3;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=PDZ and LIM domain protein 5 isoform f {ECO:0000313|EMBL:JAB18452.1};
GN Name=PDLIM5 {ECO:0000313|EMBL:JAB18452.1};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|EMBL:JAB18452.1};
RN [1] {ECO:0000313|EMBL:JAB18452.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Hippocampus {ECO:0000313|EMBL:JAB18452.1};
RX PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT sequences.";
RL Gigascience 3:14-14(2014).
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DR EMBL; GAMS01004684; JAB18452.1; -; mRNA.
DR AlphaFoldDB; U3CHM3; -.
DR Bgee; ENSCJAG00000006882; Expressed in heart and 6 other cell types or tissues.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09453; LIM1_ENH; 1.
DR CDD; cd09457; LIM2_ENH; 1.
DR CDD; cd09459; LIM3_ENH; 1.
DR CDD; cd00992; PDZ_signaling; 1.
DR Gene3D; 2.30.42.10; -; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 3.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24214:SF32; PDZ AND LIM DOMAIN PROTEIN 5; 1.
DR PANTHER; PTHR24214; PDZ AND LIM DOMAIN PROTEIN ZASP; 1.
DR Pfam; PF00412; LIM; 3.
DR Pfam; PF00595; PDZ; 1.
DR SMART; SM00132; LIM; 3.
DR SMART; SM00228; PDZ; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 3.
DR SUPFAM; SSF50156; PDZ domain-like; 1.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 3.
DR PROSITE; PS50106; PDZ; 1.
PE 2: Evidence at transcript level;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038};
KW Metal-binding {ECO:0000256|ARBA:ARBA00023038};
KW Zinc {ECO:0000256|ARBA:ARBA00023038}.
SQ SEQUENCE 625 AA; 67822 MW; B1FC9DA7537D1575 CRC64;
MSNYSVSLVG PAPWGFRLQG GKDFNMPLTI SSLKDGGKAA QANVRIGDVV LTIDGISAQG
MTHLEAQNKI KGCTGSLNMT LQRASATPKP EPVPVQKPTV TSVCSETSQE LAEGQRRGSQ
GDSKQQNGKI PPKRPPRKHI VERNTEFYHI PTHSDASKKR LIEDTEDWRP RTGTTQSRSF
RILAQITGTE HLKESETDNT KKAKFDSSLE DLHKSGLHPP ATPQVLTIGS QVATLSKVAT
TYSSLSCYTG NVEYSFEGFR NFSTFSSPAR YSAAVLSSAA ATVSAVIAAK TRLYTPERYH
SILDALCISP VSKPLAFSYL QSSRKSTGSI HVKKTSNSQE PSPQLASSVA STRSMPESLD
SPASGRPGVA SLATAAAFKP VGSTGIIKSP SWQRPNQAVP STGRISNSAT SSGAVAPANS
ALGQPQPSDQ DTLVQRAEHI PAGKRTPMCA HCNQVIRGPF LVALGKSWHP EEFNCAHCKN
TMAYIGFVEE KGALYCELCY EKFFAPECGR CQRKILGEVI NALKQTWHVS CFVCVACGKP
IRNNVFHLED GEPYCETDYY ALFGTICHGC EFPIEAGDMF LEALGYTWHD TCFVCSVCCE
SLEGQTFFSK KDKPLCKKHA HSVNF
//