ID U3JNY1_FICAL Unreviewed; 297 AA.
AC U3JNY1;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 2.
DT 24-JAN-2024, entry version 49.
DE SubName: Full=Four and a half LIM domains 1 {ECO:0000313|Ensembl:ENSFALP00000004485.2};
GN Name=FHL1 {ECO:0000313|Ensembl:ENSFALP00000004485.2};
OS Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000004485.2, ECO:0000313|Proteomes:UP000016665};
RN [1] {ECO:0000313|Ensembl:ENSFALP00000004485.2, ECO:0000313|Proteomes:UP000016665}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23103876; DOI=10.1038/nature11584;
RA Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA Wolf J.B.;
RT "The genomic landscape of species divergence in Ficedula flycatchers.";
RL Nature 491:756-760(2012).
RN [2] {ECO:0000313|Ensembl:ENSFALP00000004485.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR RefSeq; XP_005045836.1; XM_005045779.2.
DR AlphaFoldDB; U3JNY1; -.
DR STRING; 59894.ENSFALP00000004485; -.
DR Ensembl; ENSFALT00000004509.2; ENSFALP00000004485.2; ENSFALG00000004308.2.
DR GeneID; 101808609; -.
DR KEGG; fab:101808609; -.
DR CTD; 2273; -.
DR eggNOG; KOG1704; Eukaryota.
DR GeneTree; ENSGT00940000154833; -.
DR HOGENOM; CLU_001357_2_0_1; -.
DR Proteomes; UP000016665; Chromosome 4A.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0007517; P:muscle organ development; IEA:InterPro.
DR CDD; cd09424; LIM2_FHL1; 1.
DR CDD; cd09429; LIM3_FHL1; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 4.
DR InterPro; IPR042997; Fhl1.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR47029; FOUR AND A HALF LIM DOMAINS PROTEIN 1; 1.
DR PANTHER; PTHR47029:SF2; FOUR AND A HALF LIM DOMAINS PROTEIN 1; 1.
DR Pfam; PF00412; LIM; 4.
DR SMART; SM00132; LIM; 4.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 5.
DR PROSITE; PS00478; LIM_DOMAIN_1; 4.
DR PROSITE; PS50023; LIM_DOMAIN_2; 3.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016665};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 54..115
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 116..177
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 236..297
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
SQ SEQUENCE 297 AA; 34121 MW; EB0C552AE9220966 CRC64;
MAFHRHTGPG SYTVGTMSER FDCHYCRDPL QGKKYVQKEG RHCCVKCFEK FCANTCTECK
KPIGADSKEL HFKNRYWHDN CFRCFKCYTS LVNEPFMLRE NNKVWCSNCT AAEDAPRCKG
CFKPIIAGDQ NVEYKKMVWH KDCFTCSQCK QVIGSGSFFP KGDEFYCVSC HEHKFAKTCA
KCKNPITSGG LTYQEQPWHS ECFICSNCKK QLGGKRFTAV EDQFYCVECY KECVAKKCAG
CKNPITGFGR GTSVVNYEDE SWHDYCFKCT KCARGLANKR FVCHNGKIYC AECPKRL
//
