ID U3JRU8_FICAL Unreviewed; 442 AA.
AC U3JRU8;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 61.
DE SubName: Full=General transcription factor IIE subunit 1 {ECO:0000313|Ensembl:ENSFALP00000005502.1};
GN Name=GTF2E1 {ECO:0000313|Ensembl:ENSFALP00000005502.1};
OS Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000005502.1, ECO:0000313|Proteomes:UP000016665};
RN [1] {ECO:0000313|Ensembl:ENSFALP00000005502.1, ECO:0000313|Proteomes:UP000016665}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23103876; DOI=10.1038/nature11584;
RA Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA Wolf J.B.;
RT "The genomic landscape of species divergence in Ficedula flycatchers.";
RL Nature 491:756-760(2012).
RN [2] {ECO:0000313|Ensembl:ENSFALP00000005502.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the TFIIE alpha subunit family.
CC {ECO:0000256|ARBA:ARBA00008947}.
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DR RefSeq; XP_005038548.1; XM_005038491.1.
DR RefSeq; XP_005038549.1; XM_005038492.2.
DR RefSeq; XP_005038550.1; XM_005038493.2.
DR RefSeq; XP_005038551.1; XM_005038494.2.
DR AlphaFoldDB; U3JRU8; -.
DR STRING; 59894.ENSFALP00000005502; -.
DR Ensembl; ENSFALT00000005528.2; ENSFALP00000005502.1; ENSFALG00000005290.2.
DR GeneID; 101805828; -.
DR KEGG; fab:101805828; -.
DR CTD; 2960; -.
DR eggNOG; KOG2593; Eukaryota.
DR GeneTree; ENSGT00390000016696; -.
DR HOGENOM; CLU_051021_1_0_1; -.
DR OMA; DAIKWKV; -.
DR OrthoDB; 5395944at2759; -.
DR Proteomes; UP000016665; Chromosome 1.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IEA:InterPro.
DR Gene3D; 6.10.140.1250; -; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039997; TFE.
DR InterPro; IPR017919; TFIIE/TFIIEa_HTH.
DR InterPro; IPR002853; TFIIE_asu.
DR InterPro; IPR021600; TFIIE_asu_C.
DR InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13097:SF8; GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1; 1.
DR PANTHER; PTHR13097; TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT; 1.
DR Pfam; PF11521; TFIIE-A_C; 1.
DR Pfam; PF02002; TFIIE_alpha; 1.
DR SMART; SM00531; TFIIE; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51344; HTH_TFE_IIE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000016665};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 14..104
FT /note="HTH TFE/IIEalpha-type"
FT /evidence="ECO:0000259|PROSITE:PS51344"
FT REGION 264..301
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..377
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 265..281
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 334..357
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 442 AA; 49918 MW; 132355D7E6F31406 CRC64;
MTDPDVLTEV PAALKRLAKY VVRGFYGIEH ALALDILIRN PCVKEEDMLE LLKFDRKQLR
AVLNTLKGDK FIKCRMRVET APDGKTTRHN YYFINYRLLV NVVKYKLDHM RRRIETDERD
STNRASFKCP ICFSTFTDLE ANQLFDPRTG TFRCTFCETE VEEDESAMPK KDARTLVARF
NEQIEPIYAL LRETEDVNLA YEILEPEPTE IPALKQSKER AAGAGSGAAA GLAGGHHREA
WTTKGPSYED LYTQNVVISM EDQEDLNRSA SEGKPARERP IWLRESTVQG AYDPDEIKDG
GRDLDAFQER EESRTALDDN EEVMRALLIH EKKTPSASTV TVSGAAPLSG GNGSDSESET
SESEEESPPR PAAMATITYG LEEEEEDEEF EVVAEDPTVT VAGRPHSYSQ VSQRPELVAQ
MTPEEKEVYI AMGQRMFEDM FD
//
