ID U3K547_FICAL Unreviewed; 558 AA.
AC U3K547;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 2.
DT 24-JAN-2024, entry version 45.
DE SubName: Full=Ring finger protein 180 {ECO:0000313|Ensembl:ENSFALP00000010151.2};
GN Name=RNF180 {ECO:0000313|Ensembl:ENSFALP00000010151.2};
OS Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000010151.2, ECO:0000313|Proteomes:UP000016665};
RN [1] {ECO:0000313|Ensembl:ENSFALP00000010151.2, ECO:0000313|Proteomes:UP000016665}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23103876; DOI=10.1038/nature11584;
RA Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA Wolf J.B.;
RT "The genomic landscape of species divergence in Ficedula flycatchers.";
RL Nature 491:756-760(2012).
RN [2] {ECO:0000313|Ensembl:ENSFALP00000010151.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; U3K547; -.
DR Ensembl; ENSFALT00000010191.2; ENSFALP00000010151.2; ENSFALG00000009728.2.
DR eggNOG; ENOG502QQJ8; Eukaryota.
DR GeneTree; ENSGT00950000182909; -.
DR HOGENOM; CLU_039803_0_0_1; -.
DR Proteomes; UP000016665; Chromosome Z.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:Ensembl.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0031624; F:ubiquitin conjugating enzyme binding; IEA:Ensembl.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IEA:Ensembl.
DR GO; GO:0030534; P:adult behavior; IEA:Ensembl.
DR GO; GO:0042415; P:norepinephrine metabolic process; IEA:Ensembl.
DR GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
DR GO; GO:0031398; P:positive regulation of protein ubiquitination; IEA:Ensembl.
DR GO; GO:0000209; P:protein polyubiquitination; IEA:Ensembl.
DR GO; GO:0042428; P:serotonin metabolic process; IEA:Ensembl.
DR CDD; cd16554; RING-HC_RNF180; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR033263; RNF180.
DR InterPro; IPR045790; RNF180_C.
DR InterPro; IPR018957; Znf_C3HC4_RING-type.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46717; E3 UBIQUITIN-PROTEIN LIGASE RNF180; 1.
DR PANTHER; PTHR46717:SF1; E3 UBIQUITIN-PROTEIN LIGASE RNF180; 1.
DR Pfam; PF19332; RNF180_C; 1.
DR Pfam; PF00097; zf-C3HC4; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000016665};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 532..556
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 397..439
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 352..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 369..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 558 AA; 63953 MW; 51EEA110347EA43F CRC64;
MSNQEAGVLR CWSCTKHIAN AVFLAKCNGK ETSKITQSSA AAQNSCNVWH VSLEAIPEWV
KCVIEKAQWK IGKLHCPFCE ACLGSFNFVC NKECSCGQLV NRHFCKTWTE HQPPFSVKLS
KSSEKHLLLK IQSGFNKDTC HEVVNATLEI KNHGLSCPAG SNNSAGRLTE ALCLEVRTPR
YEIESKKLPL KASCYPIKDA FTVNPFHGRS RSLDLNTRGR FVLSPVLYET CSMGTLYRGR
NENPPAYIQG NLQLESSRKD SSSFQDLYSS SADILQNQFQ VTSITKLLHK ETESECDFEV
TGQSSGSIIA DGSPFVINLS SPTRAVEDKQ YITHGNLVRP MSISFNQKLS KRERNKSNCL
RRKQRRREQC LQKQPANDHL HTDDEHELRG DKESYLCAVC LDVYFNPYMC YPCHHIFCEP
CLRMLAKDNP TSTPCPLCRT TIARVFFQTD LNNSTRSFFP VEYLNLKENF QKSNSAKWPL
PSCKKAFRVF EAGFRRHSNT VTRRHFPHAA HRMDYMDFED DSRGWRFDMD MVIIYIYSVN
WIIGFIVFCF LCYFFFPL
//