GenomeNet

Database: UniProt
Entry: U3KDG0_FICAL
LinkDB: U3KDG0_FICAL
Original site: U3KDG0_FICAL 
ID   U3KDG0_FICAL            Unreviewed;       755 AA.
AC   U3KDG0;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   24-JAN-2024, entry version 64.
DE   SubName: Full=Amyloid beta precursor protein binding family A member 2 {ECO:0000313|Ensembl:ENSFALP00000013064.1};
GN   Name=APBA2 {ECO:0000313|Ensembl:ENSFALP00000013064.1};
OS   Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX   NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000013064.1, ECO:0000313|Proteomes:UP000016665};
RN   [1] {ECO:0000313|Ensembl:ENSFALP00000013064.1, ECO:0000313|Proteomes:UP000016665}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23103876; DOI=10.1038/nature11584;
RA   Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA   Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA   Wolf J.B.;
RT   "The genomic landscape of species divergence in Ficedula flycatchers.";
RL   Nature 491:756-760(2012).
RN   [2] {ECO:0000313|Ensembl:ENSFALP00000013064.1}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
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DR   RefSeq; XP_005052074.1; XM_005052017.2.
DR   RefSeq; XP_016156496.1; XM_016301010.1.
DR   AlphaFoldDB; U3KDG0; -.
DR   STRING; 59894.ENSFALP00000013064; -.
DR   Ensembl; ENSFALT00000013118.2; ENSFALP00000013064.1; ENSFALG00000012520.2.
DR   GeneID; 101817026; -.
DR   KEGG; fab:101817026; -.
DR   CTD; 321; -.
DR   eggNOG; KOG3605; Eukaryota.
DR   GeneTree; ENSGT00940000158943; -.
DR   HOGENOM; CLU_013563_3_0_1; -.
DR   OMA; MSPEHSG; -.
DR   OrthoDB; 2881953at2759; -.
DR   Proteomes; UP000016665; Chromosome 10.
DR   CDD; cd00992; PDZ_signaling; 2.
DR   CDD; cd01208; PTB_X11; 1.
DR   Gene3D; 2.30.42.10; -; 2.
DR   Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR   InterPro; IPR001478; PDZ.
DR   InterPro; IPR036034; PDZ_sf.
DR   InterPro; IPR011993; PH-like_dom_sf.
DR   InterPro; IPR006020; PTB/PI_dom.
DR   PANTHER; PTHR12345:SF12; AMYLOID-BETA A4 PRECURSOR PROTEIN-BINDING FAMILY A MEMBER 2; 1.
DR   PANTHER; PTHR12345; SYNTENIN RELATED; 1.
DR   Pfam; PF00595; PDZ; 2.
DR   Pfam; PF00640; PID; 1.
DR   SMART; SM00228; PDZ; 2.
DR   SMART; SM00462; PTB; 1.
DR   SUPFAM; SSF50156; PDZ domain-like; 2.
DR   SUPFAM; SSF50729; PH domain-like; 1.
DR   PROSITE; PS50106; PDZ; 2.
DR   PROSITE; PS01179; PID; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000016665};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   DOMAIN          374..561
FT                   /note="PID"
FT                   /evidence="ECO:0000259|PROSITE:PS01179"
FT   DOMAIN          574..659
FT                   /note="PDZ"
FT                   /evidence="ECO:0000259|PROSITE:PS50106"
FT   DOMAIN          665..741
FT                   /note="PDZ"
FT                   /evidence="ECO:0000259|PROSITE:PS50106"
FT   REGION          1..95
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          182..229
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          244..359
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        79..95
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        244..258
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        259..285
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        300..318
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        323..354
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   755 AA;  84022 MW;  4E895D15F0FA4739 CRC64;
     MANRKHQSIT ASMLDHRARA CPTSSHNREP QNEESDLPIE DYAEKEAELA TVRPGSPTPV
     EHECNDHSGD GDSSSDYVNN TSEEEDYDEG LPEEEEGITY YIRYCPEDDS YLEGMDCNGE
     EYAPHEEHHV ETDDCQEAVE EWAEGKIQHQ DENEVMDRQE WQEGQDNGIQ ILEDEASSLE
     IQDQEENIQY CQSEGDYPDY YPAEANGNSQ GISPYHSRKE DAELEEQEED IDQIVAEIKM
     SMSMSSINST TEMSPEHSGT ENMAHDYKET CSKGEAVHSA NRHEGRPKSL NIPSASKHSG
     DVHRGFKAKS RSPEDRQKWP QEQMCNGLEQ PRKQQRSDLN GPADNNNPPE TKKVSSFPSF
     VDVPGPCEPE DLIDGIIFAA NYLGSTQLLS ERNPSKNIRM MQAQEAVSRV KRMQKAAKIK
     KKATSEGDSQ ALTEVDLFIS TQRIKVLNAD TQETMMDHAL RTISYIADIG NIVVLMARRR
     MPRSASQDCI ETTPGGQEGK KQYKMICHVF ESEDAQLIAQ SIGQAFSVAY QEFLRANGIN
     PEDLSQKEYS DIINTQEMYN DDLIHFSNSE NCKELQLEKQ KGEILGVVIV ESGWGSILPT
     VILANMMNGG PAARSGKLSI GDQIMSINGT SLVGLPLATC QGIIKGLKNQ TQVKLNIVSC
     PPVTTVLIKR PDLKYQLGFS VQNGIICSLM RGGIAERGGV RVGHRIIEIN GQSVVATAHE
     KIVQALSNSV GEIHMKTMPA AMFRLLTGQE TPLYI
//
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