ID U4JWX7_9VIBR Unreviewed; 238 AA.
AC U4JWX7;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Putative Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCO57420.1};
GN ORFNames=VIBNI_A1285 {ECO:0000313|EMBL:CCO57420.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO57420.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO57420.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
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DR EMBL; FO203526; CCO57420.1; -; Genomic_DNA.
DR RefSeq; WP_022550371.1; NZ_AP027045.1.
DR AlphaFoldDB; U4JWX7; -.
DR STRING; 28173.VIBNI_A1285; -.
DR KEGG; vni:VIBNI_A1285; -.
DR PATRIC; fig|1260221.3.peg.1231; -.
DR eggNOG; COG2186; Bacteria.
DR OrthoDB; 9028214at2; -.
DR Proteomes; UP000016895; Chromosome 1.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF5; GALACTONATE OPERON TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016895};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..73
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 238 AA; 26988 MW; 20C0562780BA0B54 CRC64;
MTKKQFLHEH VATEIGQRVV SGRYPPGVMF GNEQDLIEEF NVSRTAVREA VKVLNGKGMV
ESVPRLGLRV RPTSEWHMLD SEVLSWVVQS SLSSDLIVEL YDLRLAFEPR AAYLAANRFS
KDDDIAIRRA LQGMTLYLDE EDRVRHDLAF HCAILDATGN RFYRSLGDMI SVVLQHTFRL
AHRDLDDESW VDEHKKVYDA IVAGNGQLAS ELMSSLLENA LNDLKQATRR ASEEASNE
//