ID U4K644_9VIBR Unreviewed; 308 AA.
AC U4K644;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Putative Bacterial regulatory protein, LysR family {ECO:0000313|EMBL:CCO58081.1};
GN ORFNames=VIBNI_A1988 {ECO:0000313|EMBL:CCO58081.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO58081.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO58081.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; FO203526; CCO58081.1; -; Genomic_DNA.
DR RefSeq; WP_022550924.1; NC_022528.1.
DR AlphaFoldDB; U4K644; -.
DR STRING; 28173.VIBNI_A1988; -.
DR KEGG; vni:VIBNI_A1988; -.
DR PATRIC; fig|1260221.3.peg.1892; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 8839911at2; -.
DR Proteomes; UP000016895; Chromosome 1.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR037402; YidZ_PBP2.
DR PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR PANTHER; PTHR30118:SF15; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000016895}.
FT DOMAIN 4..61
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 308 AA; 34919 MW; BB059AC509D90D5F CRC64;
MANLDLNLLV IFDVIMQEQS ITAAAERLSM TQPSVSNAVA RMRHAWKDPL FVKQGRGIRP
SPYAEKLWRE ISLPLDDIKR AAEKQVFKPA TLKRTFRIAV TDWMADLFWL PLRKMIEEEA
PQVDIHAVPY TVNGENLLLN ADVDMVLDYF EGRSGKVQSQ HLFDNHFVCA MRADHPLAGE
ELNLTSFTSA EHLLLSLSGE AIGGVDKALQ QQGLKRRISM TVNHCYHIPK ILINTDLITT
IPLPIIIDAV EAGQLIIKKA PFDLKAGPIS MTWHTRHQQD KEVLWLRDKV QAVLKNHLHE
SIFVPPFT
//
