GenomeNet

Database: UniProt
Entry: U4UUT3_DENPD
LinkDB: U4UUT3_DENPD
Original site: U4UUT3_DENPD 
ID   U4UUT3_DENPD            Unreviewed;       327 AA.
AC   U4UUT3;
DT   11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2013, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=Rhamnogalacturonan endolyase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=D910_11247 {ECO:0000313|EMBL:ERL93961.1};
OS   Dendroctonus ponderosae (Mountain pine beetle).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia;
OC   Curculionidae; Scolytinae; Dendroctonus.
OX   NCBI_TaxID=77166 {ECO:0000313|EMBL:ERL93961.1, ECO:0000313|Proteomes:UP000030742};
RN   [1] {ECO:0000313|EMBL:ERL93961.1, ECO:0000313|Proteomes:UP000030742}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23537049; DOI=10.1186/gb-2013-14-3-r27;
RA   Keeling C.I., Yuen M.M., Liao N.Y., Roderick Docking T., Chan S.K.,
RA   Taylor G.A., Palmquist D.L., Jackman S.D., Nguyen A., Li M., Henderson H.,
RA   Janes J.K., Zhao Y., Pandoh P., Moore R., Sperling F.A., W Huber D.P.,
RA   Birol I., Jones S.J., Bohlmann J.;
RT   "Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins,
RT   a major forest pest.";
RL   Genome Biol. 14:R27-R27(2013).
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DR   EMBL; KB632375; ERL93961.1; -; Genomic_DNA.
DR   AlphaFoldDB; U4UUT3; -.
DR   Proteomes; UP000030742; Unassembled WGS sequence.
DR   GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR   CDD; cd10317; RGL4_C; 1.
DR   CDD; cd10316; RGL4_M; 1.
DR   Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR   Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR   InterPro; IPR013784; Carb-bd-like_fold.
DR   InterPro; IPR008979; Galactose-bd-like_sf.
DR   InterPro; IPR029413; RG-lyase_II.
DR   InterPro; IPR029411; RG-lyase_III.
DR   PANTHER; PTHR32018:SF1; RHAMNOGALACTURONAN ENDOLYASE; 1.
DR   PANTHER; PTHR32018; RHAMNOGALACTURONATE LYASE FAMILY PROTEIN; 1.
DR   Pfam; PF14683; CBM-like; 1.
DR   Pfam; PF14686; fn3_3; 1.
DR   SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR   SUPFAM; SSF49452; Starch-binding domain-like; 1.
PE   4: Predicted;
KW   Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030742}.
FT   DOMAIN          89..162
FT                   /note="Rhamnogalacturonan lyase"
FT                   /evidence="ECO:0000259|Pfam:PF14686"
FT   DOMAIN          176..323
FT                   /note="Rhamnogalacturonan lyase"
FT                   /evidence="ECO:0000259|Pfam:PF14683"
SQ   SEQUENCE   327 AA;  36555 MW;  50E2EAB137F17930 CRC64;
     MKQDLTVHQY SLVANYFLSA HFGSASFNAF PGWTHIYGPF LIYFPSGNDE QILNAVEAQV
     TIEQEKWPYS FVNDNDYPLI RGSVSGKVTG QTKAAITLYD STEEQYDLQQ LGYLYATTTD
     ANGNFVINNV RPGFYKIVAY PVAGQGSENL AEQTVTITAG ASEIVDFFLP EPENILWAIG
     EANRRSNEFN YADQDRNYKW EFEPPVENTF IVGESDPRND WYYAQSQPGT WTIKYQDNHD
     GHSRTLRLPL AAASKSVLLV SINGNNIAQL ELTNDASIYR SALQSGRYRS VILPVEPSHV
     LTGENTLDLT VHSGAVMYDC ISLQVNG
//
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