ID U5BRL6_9BACT Unreviewed; 476 AA.
AC U5BRL6;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Pectate lyase superfamily protein domain-containing protein {ECO:0000259|Pfam:PF12708};
GN ORFNames=P872_17045 {ECO:0000313|EMBL:ERM83230.1};
OS Rhodonellum psychrophilum GCM71 = DSM 17998.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae;
OC Rhodonellum.
OX NCBI_TaxID=1123057 {ECO:0000313|EMBL:ERM83230.1, ECO:0000313|Proteomes:UP000016843};
RN [1] {ECO:0000313|EMBL:ERM83230.1, ECO:0000313|Proteomes:UP000016843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GCM71 {ECO:0000313|EMBL:ERM83230.1,
RC ECO:0000313|Proteomes:UP000016843};
RX PubMed=24309741;
RA Hauptmann A.L., Glaring M.A., Hallin P.F., Prieme A., Stougaard P.;
RT "Draft Genome Sequence of the Psychrophilic and Alkaliphilic Rhodonellum
RT psychrophilum Strain GCM71T.";
RL Genome Announc. 1:e01014-13(2013).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 28 family.
CC {ECO:0000256|ARBA:ARBA00008834, ECO:0000256|RuleBase:RU361169}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERM83230.1}.
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DR EMBL; AWXR01000016; ERM83230.1; -; Genomic_DNA.
DR RefSeq; WP_019597425.1; NZ_KB906676.1.
DR AlphaFoldDB; U5BRL6; -.
DR PATRIC; fig|1123057.7.peg.1898; -.
DR eggNOG; COG5434; Bacteria.
DR Proteomes; UP000016843; Unassembled WGS sequence.
DR GO; GO:0004650; F:polygalacturonase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 2.160.20.10; Single-stranded right-handed beta-helix, Pectin lyase-like; 1.
DR InterPro; IPR000743; Glyco_hydro_28.
DR InterPro; IPR006626; PbH1.
DR InterPro; IPR024535; Pectate_lyase_SF_prot.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR PANTHER; PTHR31339; PECTIN LYASE-RELATED; 1.
DR PANTHER; PTHR31339:SF9; PLASMIN AND FIBRONECTIN-BINDING PROTEIN A; 1.
DR Pfam; PF00295; Glyco_hydro_28; 1.
DR Pfam; PF12708; Pectate_lyase_3; 1.
DR SMART; SM00710; PbH1; 5.
DR SUPFAM; SSF51126; Pectin lyase-like; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361169};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361169};
KW Reference proteome {ECO:0000313|Proteomes:UP000016843}.
FT DOMAIN 50..102
FT /note="Pectate lyase superfamily protein"
FT /evidence="ECO:0000259|Pfam:PF12708"
SQ SEQUENCE 476 AA; 52145 MW; EC4E1BD1F5E4A5C1 CRC64;
MMNPKLLLLA LISLVVISCG EKERSLKDEF DWYDKVGAKD FPDQKQPFLV NDFGAVADGK
TMNTKAIQSA IDACAKQGGG VVSFNAGEYL TGSLFIKSGV NLWIGEKVTL LGSQNLEDYP
DMPTRVAGIE MVWPAALINV IGQQKAAVTG KGVIHAQGKP FWEAYWRTRE EYEKRGLRWI
VDYDVKRPRT ILVSESSDVT LEDLTLKQAG FWTVHILYSQ NITAKGLIIR NNLDGHGPST
DGIDIDSSSY ILVENCDIDC NDDNFCLKSG RDADGLRVNR PTEYVVIRNS ISRAGGGLIT
FGSETSGGIR HVVAHDLQAK GTGVGLRFKS AMTRGGTVEN IHLRDIQMDT VGVAIEIGLN
WNPSYSYSEL PEGFDADSVP DHWKTMLTRV VPKALGIPTF KNIEITNLQV QKSKMAITIA
GAETSAIQNI RIKNSTIHTQ TGGSIIFAEG VIFENSVVIP EDGKEISVGE SKEIKF
//
