ID U5C3I8_9BACT Unreviewed; 340 AA.
AC U5C3I8;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=LacI family transcriptional regulator {ECO:0000313|EMBL:ERM82767.1};
GN ORFNames=P872_04415 {ECO:0000313|EMBL:ERM82767.1};
OS Rhodonellum psychrophilum GCM71 = DSM 17998.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae;
OC Rhodonellum.
OX NCBI_TaxID=1123057 {ECO:0000313|EMBL:ERM82767.1, ECO:0000313|Proteomes:UP000016843};
RN [1] {ECO:0000313|EMBL:ERM82767.1, ECO:0000313|Proteomes:UP000016843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GCM71 {ECO:0000313|EMBL:ERM82767.1,
RC ECO:0000313|Proteomes:UP000016843};
RX PubMed=24309741;
RA Hauptmann A.L., Glaring M.A., Hallin P.F., Prieme A., Stougaard P.;
RT "Draft Genome Sequence of the Psychrophilic and Alkaliphilic Rhodonellum
RT psychrophilum Strain GCM71T.";
RL Genome Announc. 1:e01014-13(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERM82767.1}.
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DR EMBL; AWXR01000022; ERM82767.1; -; Genomic_DNA.
DR RefSeq; WP_019598433.1; NZ_KB906680.1.
DR AlphaFoldDB; U5C3I8; -.
DR PATRIC; fig|1123057.7.peg.2386; -.
DR eggNOG; COG1609; Bacteria.
DR OrthoDB; 891936at2; -.
DR Proteomes; UP000016843; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016843};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 6..60
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
FT REGION 313..340
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 340 AA; 38382 MW; E081903CA589EFD2 CRC64;
MKKGKSTIHD IAEKLGITAS TVSRALNDHP RISENTKKLV IKMARQLNYQ PNNIASALRS
GKSKLIGVVV PTVNRNFFSS VIRGIEDIAN TLDYKVIISQ SYEDYEKEVQ TVEALLNARV
DGIIASIAKN TEKFDHFQKV LDKGIPLVLF DRITNSLEVS QVVIDDHYGA YQTVDHLIQQ
GCKRIVHFTS PKKINIYKER LRGYMDALQD HSIPFDPLLI EESNMQLEDG RQSMLNILEK
NIPFDAVFSS SDYAAMGAMQ VLKERGFKIP EQVMMAGFGN EPFTSFTDPP LTTVDQKSIP
MGKETAETFF ELLKSDQKKD SPQKTVLKPE LIIRRSSQKK
//
