ID U5C8R3_9BACT Unreviewed; 524 AA.
AC U5C8R3;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=Alpha-amylase {ECO:0000256|RuleBase:RU361134};
DE EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};
GN ORFNames=P872_24605 {ECO:0000313|EMBL:ERM84602.1};
OS Rhodonellum psychrophilum GCM71 = DSM 17998.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Cytophagaceae;
OC Rhodonellum.
OX NCBI_TaxID=1123057 {ECO:0000313|EMBL:ERM84602.1, ECO:0000313|Proteomes:UP000016843};
RN [1] {ECO:0000313|EMBL:ERM84602.1, ECO:0000313|Proteomes:UP000016843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GCM71 {ECO:0000313|EMBL:ERM84602.1,
RC ECO:0000313|Proteomes:UP000016843};
RX PubMed=24309741;
RA Hauptmann A.L., Glaring M.A., Hallin P.F., Prieme A., Stougaard P.;
RT "Draft Genome Sequence of the Psychrophilic and Alkaliphilic Rhodonellum
RT psychrophilum Strain GCM71T.";
RL Genome Announc. 1:e01014-13(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in
CC polysaccharides containing three or more (1->4)-alpha-linked D-
CC glucose units.; EC=3.2.1.1; Evidence={ECO:0000256|RuleBase:RU361134};
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061, ECO:0000256|RuleBase:RU003615}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERM84602.1}.
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DR EMBL; AWXR01000003; ERM84602.1; -; Genomic_DNA.
DR AlphaFoldDB; U5C8R3; -.
DR SMR; U5C8R3; -.
DR PATRIC; fig|1123057.7.peg.450; -.
DR eggNOG; COG0366; Bacteria.
DR Proteomes; UP000016843; Unassembled WGS sequence.
DR GO; GO:0004556; F:alpha-amylase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0043169; F:cation binding; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR CDD; cd11316; AmyAc_bac2_AmyA; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR InterPro; IPR006046; Alpha_amylase.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR045857; O16G_dom_2.
DR PANTHER; PTHR10357; ALPHA-AMYLASE FAMILY MEMBER; 1.
DR PANTHER; PTHR10357:SF179; NEUTRAL AND BASIC AMINO ACID TRANSPORT PROTEIN RBAT; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR PRINTS; PR00110; ALPHAAMYLASE.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism {ECO:0000256|RuleBase:RU361134};
KW Glycosidase {ECO:0000256|RuleBase:RU361134};
KW Hydrolase {ECO:0000256|RuleBase:RU361134};
KW Reference proteome {ECO:0000313|Proteomes:UP000016843}.
FT DOMAIN 47..404
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 524 AA; 60752 MW; 7F13F3D98BF340E5 CRC64;
MAFSFLKQKF MKKIFIYCFI FFVAVSCKNS GDGKLENHWP NAGITYEIFI QSFYDTNSDG
IGDINGVTKK LDHVKELGAN AIWFMPIMPS PSYHKYDVTD YKAIHPDYGT LEDFKKLMKE
AHKRDIKIVI DLIINHTSSE HPWFLESKKG RDNPYRDYYV WAQKDTISAY LNKKTITLDS
DNIRQWHNPG SGEDFYYGFF IGGMPDLNFD NPKVRKEIYD IGRFWLEEMG VDGFRLDAAK
HVFPDDRPVD NHEFWIEFRS EMEKIKPDVY LVGEVYDMKE VVAPYLPGLP ALFNFDFHYT
LIDAFKESNG SLLVEKQKEI LDYYLGITPD FIDATFSSNH DQPRLLNSLN ENPRKLKQAI
AILMTMPGAP YLYYGEEIGM LGRKPDENIR EPFLWDIQAN DKGRTTWMEP VYSIDEMVTP
LAIQKSMSTS YFNHYKEIIA VRNTNRGLAL GNLELYSEDL PKPIMAYFRN HKDQNLFVVH
NLSDQGFTIA LPEGYENLIY SFGMSKADDG SISMPPYSSI VLEK
//
