ID U5D683_AMBTC Unreviewed; 478 AA.
AC U5D683;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=HTH TFE/IIEalpha-type domain-containing protein {ECO:0000259|PROSITE:PS51344};
GN ORFNames=AMTR_s00039p00190210 {ECO:0000313|EMBL:ERN15868.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN15868.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
CC -!- SIMILARITY: Belongs to the TFIIE alpha subunit family.
CC {ECO:0000256|ARBA:ARBA00008947}.
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DR EMBL; KI392495; ERN15868.1; -; Genomic_DNA.
DR RefSeq; XP_006854401.1; XM_006854339.2.
DR AlphaFoldDB; U5D683; -.
DR STRING; 13333.U5D683; -.
DR EnsemblPlants; ERN15868; ERN15868; AMTR_s00039p00190210.
DR GeneID; 18444161; -.
DR Gramene; ERN15868; ERN15868; AMTR_s00039p00190210.
DR KEGG; atr:18444161; -.
DR eggNOG; KOG2593; Eukaryota.
DR HOGENOM; CLU_046063_0_0_1; -.
DR OMA; DAIKWKV; -.
DR OrthoDB; 7984at2759; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005673; C:transcription factor TFIIE complex; IBA:GO_Central.
DR GO; GO:0001113; P:transcription open complex formation at RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR039997; TFE.
DR InterPro; IPR017919; TFIIE/TFIIEa_HTH.
DR InterPro; IPR002853; TFIIE_asu.
DR InterPro; IPR024550; TFIIEa/SarR/Rpc3_HTH_dom.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13097:SF7; GENERAL TRANSCRIPTION FACTOR IIE, POLYPEPTIDE 1, ALPHA; 1.
DR PANTHER; PTHR13097; TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT; 1.
DR Pfam; PF02002; TFIIE_alpha; 1.
DR SMART; SM00531; TFIIE; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS51344; HTH_TFE_IIE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 7..138
FT /note="HTH TFE/IIEalpha-type"
FT /evidence="ECO:0000259|PROSITE:PS51344"
FT REGION 269..293
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 351..372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 412..478
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..369
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 461..478
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 478 AA; 54208 MW; 7D1848547F10FF26 CRC64;
MSGADSFKRL VKLAARAFYD DISTKGDNQP KTGRSDNRGM AVVVLDALTR RQWVKEEDLA
KDLKLHSKQL RRTLRFFEEE KLVMRDHRRE TAKGAKVYNA ALAATGDGQL NGNSEEKMKM
HTHSYCCLDY AQIYDIVRYR IHRMKKKLKD DMEDKNTIQK YECPNCKRKY SALDALQLIS
MHDESFHCEN CNAELVAESD KKAAEEMGDG DDNARRRMRE KLRDQLQRIE VELKPLMDQL
ARVKDLPAPE FGTLQAWEAR AIAAGRAANG DSALNDSSRA AQGQGYGGTP MPFLGETRVE
VALSGVEEKE EDLKPDYAAT VRKVLPPWMI KQGMNLTNEQ RGEVKQEIKT ENASIAHPLE
EKKPKEGEKQ NAQTNIQEEY LKAYYAAILK RQQEEQAAAA YSVASTSNVM NGVSETQTER
RVGMKVKREY NEDEDDVEWE DATPSGVSSV APKINDLNEE ADAPKEEDDE DEIDWEEG
//
