ID U5NBT5_9MOLU Unreviewed; 202 AA.
AC U5NBT5;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 08-NOV-2023, entry version 41.
DE RecName: Full=Small ribosomal subunit protein uS4 {ECO:0000256|ARBA:ARBA00035254, ECO:0000256|HAMAP-Rule:MF_01306};
GN Name=rpsD {ECO:0000256|HAMAP-Rule:MF_01306};
GN ORFNames=PRV_01800 {ECO:0000313|EMBL:AGX88785.1};
OS Mycoplasma parvum str. Indiana.
OC Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=1403316 {ECO:0000313|EMBL:AGX88785.1, ECO:0000313|Proteomes:UP000017119};
RN [1] {ECO:0000313|EMBL:AGX88785.1, ECO:0000313|Proteomes:UP000017119}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Indiana {ECO:0000313|EMBL:AGX88785.1,
RC ECO:0000313|Proteomes:UP000017119};
RX PubMed=24285648;
RA do Nascimento N.C., Dos Santos A.P., Chu Y., Guimaraes A.M., Pagliaro A.,
RA Messick J.B.;
RT "Genome Sequence of Mycoplasma parvum (Formerly Eperythrozoon parvum), a
RT Diminutive Hemoplasma of the Pig.";
RL Genome Announc. 1:e00986-13(2013).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
CC {ECO:0000256|HAMAP-Rule:MF_01306}.
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy. {ECO:0000256|HAMAP-Rule:MF_01306}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5. The
CC interaction surface between S4 and S5 is involved in control of
CC translational fidelity. {ECO:0000256|HAMAP-Rule:MF_01306}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000256|ARBA:ARBA00007465, ECO:0000256|HAMAP-Rule:MF_01306}.
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DR EMBL; CP006771; AGX88785.1; -; Genomic_DNA.
DR RefSeq; WP_022769813.1; NC_022575.1.
DR AlphaFoldDB; U5NBT5; -.
DR STRING; 1403316.PRV_01800; -.
DR KEGG; mpv:PRV_01800; -.
DR PATRIC; fig|1403316.3.peg.327; -.
DR HOGENOM; CLU_092403_0_1_14; -.
DR OrthoDB; 9803672at2; -.
DR Proteomes; UP000017119; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1.
DR InterPro; IPR022801; Ribosomal_uS4.
DR InterPro; IPR005709; Ribosomal_uS4_bac-type.
DR InterPro; IPR001912; Ribosomal_uS4_N.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR NCBIfam; TIGR01017; rpsD_bact; 1.
DR PANTHER; PTHR11831; 30S 40S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR11831:SF4; 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM01390; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000017119};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01306};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01306};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01306};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01306}.
FT DOMAIN 3..94
FT /note="Small ribosomal subunit protein uS4 N-terminal"
FT /evidence="ECO:0000259|SMART:SM01390"
FT DOMAIN 95..152
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
SQ SEQUENCE 202 AA; 23707 MW; 857F7022B2834ECC CRC64;
MSRYLGPLYK KSRQHGFSFY EDGREFAKGK QREYGPGQHG PTKFKKLSLH GEQLREKQKL
AILYGLREKQ MRRFFRMAKK MQGSLALNFL ILLESKLDNL VFRSGMANTR RAARQLIVHG
HIRLNGKKVD IPSYIVPVSS IIEVAEKSRN IPVVNFFPNF TPLPFIQLEN KYKAVYLRHP
ERAEINLELN EVFATEWYKQ YT
//
