ID U7D2L4_9BACT Unreviewed; 573 AA.
AC U7D2L4;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=CALK_2414 {ECO:0000313|EMBL:ERP30749.1};
OS Chitinivibrio alkaliphilus ACht1.
OC Bacteria; Fibrobacterota; Chitinivibrionia; Chitinivibrionales;
OC Chitinivibrionaceae; Chitinivibrio.
OX NCBI_TaxID=1313304 {ECO:0000313|EMBL:ERP30749.1, ECO:0000313|Proteomes:UP000017148};
RN [1] {ECO:0000313|EMBL:ERP30749.1, ECO:0000313|Proteomes:UP000017148}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACht1 {ECO:0000313|EMBL:ERP30749.1,
RC ECO:0000313|Proteomes:UP000017148};
RX PubMed=24112708;
RA Sorokin D.Y., Gumerov V.M., Rakitin A.L., Beletsky A.V., Damste J.S.,
RA Muyzer G., Mardanov A.V., Ravin N.V.;
RT "Genome analysis of Chitinivibrio alkaliphilus gen. nov., sp. nov., a novel
RT extremely haloalkaliphilic anaerobic chitinolytic bacterium from the
RT candidate phylum Termite Group 3.";
RL Environ. Microbiol. 0:0-0(2013).
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERP30749.1}.
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DR EMBL; ASJR01000035; ERP30749.1; -; Genomic_DNA.
DR RefSeq; WP_022637762.1; NZ_ASJR01000035.1.
DR AlphaFoldDB; U7D2L4; -.
DR STRING; 1313304.CALK_2414; -.
DR PATRIC; fig|1313304.3.peg.2301; -.
DR eggNOG; COG0608; Bacteria.
DR OrthoDB; 9809852at2; -.
DR Proteomes; UP000017148; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ERP30749.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:ERP30749.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000017148}.
FT DOMAIN 85..234
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 348..444
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 463..567
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
SQ SEQUENCE 573 AA; 63672 MW; 1248BC536975632C CRC64;
MNSESIPRET IHLRTYAQST VERLMKLLSI SETLATILAG RGLTEFEQSK KFFNPHMDDF
LDPFLFPHMD AVVQRLLQAR HAEENVFIYG DYDVDGITGT SFFLRFLRKI GISCDYYIPN
RLTEGYGISR AGIDTIAAQQ ADLILSVDTG ITAVEEVAYA ASLGIDMIIT DHHEPKETEP
DCLVIDPKSH QCPFPDANLS GVGVALKVAQ ALTQRGDFPP SYWQEELDLV ALGTAADLVP
FTGENRIITY YGYRQMSQTT CHGLRALMEV QKVREGDITT ADIVFKLAPA INAAGRMGDP
QRGVKLLLCE DPAKCQLYAK ELLQKNHERR SHNTKVEREV EEWVQNSIDL SSQFGIVAAQ
REWHVGVVGI AASKIVEKYS RPSFIFAIDD SGIARGSARS VDGCNLIAAL DECQDLLIQY
GGHKMAAGAT MKADNLAEFT QRFNTSLSRQ LAHGDLRPRV YADVEVRVAQ LTPKFFATLA
RMRPFGPNNM RPVFFSKAVQ IHAPKRVGKG GAHLKMRVSQ DKQFVDAIAF GFGDRLQELT
TARSISLAYT LGQNTYRGTT TLQITVKGIE IEK
//
